Protein–RNA interactions for Protein: Q8N427

NME8, Thioredoxin domain-containing protein 3, humanhuman

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NME8Q8N427 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NME8Q8N427 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NME8Q8N427 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
NME8Q8N427 METTL26-205ENST00000397666 726 ntTSL 2 BASIC19.33■□□□□ 0.68
NME8Q8N427 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC19.33■□□□□ 0.68
NME8Q8N427 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
NME8Q8N427 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC19.33■□□□□ 0.68
NME8Q8N427 AC002558.1-201ENST00000488906 803 ntBASIC19.33■□□□□ 0.68
NME8Q8N427 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC19.33■□□□□ 0.68
NME8Q8N427 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
NME8Q8N427 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC19.33■□□□□ 0.68
NME8Q8N427 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC19.33■□□□□ 0.68
NME8Q8N427 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.33■□□□□ 0.68
NME8Q8N427 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NME8Q8N427 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NME8Q8N427 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.33■□□□□ 0.68
NME8Q8N427 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
NME8Q8N427 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.33■□□□□ 0.68
NME8Q8N427 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.33■□□□□ 0.68
NME8Q8N427 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.33■□□□□ 0.68
NME8Q8N427 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
NME8Q8N427 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
NME8Q8N427 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NME8Q8N427 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NME8Q8N427 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NME8Q8N427 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
NME8Q8N427 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
NME8Q8N427 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
NME8Q8N427 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.32■□□□□ 0.68
NME8Q8N427 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NME8Q8N427 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NME8Q8N427 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NME8Q8N427 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.32■□□□□ 0.68
NME8Q8N427 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
NME8Q8N427 MIR1233-2-201ENST00000408138 82 ntBASIC19.32■□□□□ 0.68
NME8Q8N427 MIR1233-1-201ENST00000408722 82 ntBASIC19.32■□□□□ 0.68
NME8Q8N427 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC19.32■□□□□ 0.68
NME8Q8N427 CRCP-205ENST00000431089 942 ntTSL 2 BASIC19.32■□□□□ 0.68
NME8Q8N427 S100A2-206ENST00000497140 697 ntTSL 2 BASIC19.32■□□□□ 0.68
NME8Q8N427 STK19B-204ENST00000512515 211 ntBASIC19.32■□□□□ 0.68
NME8Q8N427 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC19.32■□□□□ 0.68
NME8Q8N427 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC19.32■□□□□ 0.68
NME8Q8N427 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NME8Q8N427 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NME8Q8N427 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NME8Q8N427 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NME8Q8N427 AC148477.5-201ENST00000625164 1645 ntBASIC19.32■□□□□ 0.68
NME8Q8N427 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC19.32■□□□□ 0.68
NME8Q8N427 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.32■□□□□ 0.68
NME8Q8N427 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NME8Q8N427 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NME8Q8N427 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.32■□□□□ 0.68
NME8Q8N427 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.32■□□□□ 0.68
NME8Q8N427 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NME8Q8N427 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NME8Q8N427 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NME8Q8N427 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC19.32■□□□□ 0.68
NME8Q8N427 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC19.32■□□□□ 0.68
NME8Q8N427 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.31■□□□□ 0.68
NME8Q8N427 REXO1L9P-201ENST00000604264 2108 ntBASIC19.31■□□□□ 0.68
NME8Q8N427 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.31■□□□□ 0.68
NME8Q8N427 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
NME8Q8N427 KRT18P55-202ENST00000578578 1546 ntBASIC19.31■□□□□ 0.68
NME8Q8N427 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NME8Q8N427 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.31■□□□□ 0.68
NME8Q8N427 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
NME8Q8N427 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
NME8Q8N427 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NME8Q8N427 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NME8Q8N427 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NME8Q8N427 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NME8Q8N427 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NME8Q8N427 MYCLP1-201ENST00000372451 1075 ntBASIC19.31■□□□□ 0.68
NME8Q8N427 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NME8Q8N427 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC19.31■□□□□ 0.68
NME8Q8N427 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NME8Q8N427 HS6ST1P1-201ENST00000481504 1234 ntBASIC19.31■□□□□ 0.68
NME8Q8N427 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC19.31■□□□□ 0.68
NME8Q8N427 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC19.31■□□□□ 0.68
NME8Q8N427 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC19.31■□□□□ 0.68
NME8Q8N427 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC19.31■□□□□ 0.68
NME8Q8N427 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC19.31■□□□□ 0.68
NME8Q8N427 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC19.31■□□□□ 0.68
NME8Q8N427 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC19.31■□□□□ 0.68
NME8Q8N427 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
NME8Q8N427 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
NME8Q8N427 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NME8Q8N427 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NME8Q8N427 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.31■□□□□ 0.68
NME8Q8N427 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
NME8Q8N427 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NME8Q8N427 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NME8Q8N427 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC19.3■□□□□ 0.68
NME8Q8N427 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NME8Q8N427 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NME8Q8N427 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NME8Q8N427 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
NME8Q8N427 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NME8Q8N427 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
NME8Q8N427 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms