Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SCML4Q8N228 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SCML4Q8N228 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SCML4Q8N228 NCF1C-201ENST00000438382 1427 ntBASIC18.23■□□□□ 0.51
SCML4Q8N228 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SCML4Q8N228 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SCML4Q8N228 AC004817.3-201ENST00000602957 2129 ntBASIC18.23■□□□□ 0.51
SCML4Q8N228 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SCML4Q8N228 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
SCML4Q8N228 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
SCML4Q8N228 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SCML4Q8N228 RPS2P28-201ENST00000314255 741 ntBASIC18.23■□□□□ 0.51
SCML4Q8N228 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SCML4Q8N228 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SCML4Q8N228 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SCML4Q8N228 HNRNPDP1-201ENST00000439535 754 ntBASIC18.23■□□□□ 0.51
SCML4Q8N228 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SCML4Q8N228 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.23■□□□□ 0.51
SCML4Q8N228 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.23■□□□□ 0.51
SCML4Q8N228 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.23■□□□□ 0.51
SCML4Q8N228 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.23■□□□□ 0.51
SCML4Q8N228 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
SCML4Q8N228 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
SCML4Q8N228 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.23■□□□□ 0.51
SCML4Q8N228 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.23■□□□□ 0.51
SCML4Q8N228 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.23■□□□□ 0.51
SCML4Q8N228 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SCML4Q8N228 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SCML4Q8N228 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SCML4Q8N228 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.23■□□□□ 0.51
SCML4Q8N228 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SCML4Q8N228 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SCML4Q8N228 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
SCML4Q8N228 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
SCML4Q8N228 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
SCML4Q8N228 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
SCML4Q8N228 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SCML4Q8N228 AL135999.2-201ENST00000622438 1686 ntBASIC18.22■□□□□ 0.51
SCML4Q8N228 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SCML4Q8N228 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
SCML4Q8N228 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SCML4Q8N228 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SCML4Q8N228 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SCML4Q8N228 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.22■□□□□ 0.51
SCML4Q8N228 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
SCML4Q8N228 OR7E14P-202ENST00000530490 1290 ntBASIC18.22■□□□□ 0.51
SCML4Q8N228 AC139887.3-201ENST00000568585 713 ntBASIC18.22■□□□□ 0.51
SCML4Q8N228 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.22■□□□□ 0.51
SCML4Q8N228 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.22■□□□□ 0.51
SCML4Q8N228 AC148477.8-201ENST00000624298 468 ntBASIC18.22■□□□□ 0.51
SCML4Q8N228 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
SCML4Q8N228 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.22■□□□□ 0.51
SCML4Q8N228 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.22■□□□□ 0.51
SCML4Q8N228 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SCML4Q8N228 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SCML4Q8N228 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SCML4Q8N228 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
SCML4Q8N228 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SCML4Q8N228 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
SCML4Q8N228 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.21■□□□□ 0.51
SCML4Q8N228 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SCML4Q8N228 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.21■□□□□ 0.51
SCML4Q8N228 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
SCML4Q8N228 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SCML4Q8N228 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.21■□□□□ 0.51
SCML4Q8N228 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SCML4Q8N228 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.21■□□□□ 0.51
SCML4Q8N228 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.21■□□□□ 0.51
SCML4Q8N228 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCML4Q8N228 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCML4Q8N228 AL031284.1-201ENST00000419297 478 ntBASIC18.21■□□□□ 0.51
SCML4Q8N228 KRT18P27-201ENST00000427733 1299 ntBASIC18.21■□□□□ 0.51
SCML4Q8N228 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.21■□□□□ 0.51
SCML4Q8N228 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.21■□□□□ 0.51
SCML4Q8N228 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.21■□□□□ 0.51
SCML4Q8N228 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.21■□□□□ 0.51
SCML4Q8N228 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.21■□□□□ 0.51
SCML4Q8N228 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.21■□□□□ 0.51
SCML4Q8N228 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
SCML4Q8N228 AC004706.3-202ENST00000621574 984 ntBASIC18.21■□□□□ 0.51
SCML4Q8N228 FAM215A-202ENST00000632077 792 ntBASIC18.21■□□□□ 0.51
SCML4Q8N228 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
SCML4Q8N228 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.21■□□□□ 0.51
SCML4Q8N228 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
SCML4Q8N228 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
SCML4Q8N228 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
SCML4Q8N228 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SCML4Q8N228 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCML4Q8N228 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCML4Q8N228 HLA-A-201ENST00000376802 1334 ntBASIC18.21■□□□□ 0.51
SCML4Q8N228 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.21■□□□□ 0.5
SCML4Q8N228 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
SCML4Q8N228 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SCML4Q8N228 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.2■□□□□ 0.5
SCML4Q8N228 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SCML4Q8N228 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.2■□□□□ 0.5
SCML4Q8N228 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SCML4Q8N228 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.2■□□□□ 0.5
SCML4Q8N228 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SCML4Q8N228 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms