Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SIX5Q8N196 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
SIX5Q8N196 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SIX5Q8N196 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SIX5Q8N196 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SIX5Q8N196 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SIX5Q8N196 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
SIX5Q8N196 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.96■□□□□ 0.47
SIX5Q8N196 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SIX5Q8N196 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SIX5Q8N196 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SIX5Q8N196 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SIX5Q8N196 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SIX5Q8N196 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SIX5Q8N196 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SIX5Q8N196 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
SIX5Q8N196 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.96■□□□□ 0.47
SIX5Q8N196 COX5BP2-201ENST00000392354 334 ntBASIC17.96■□□□□ 0.47
SIX5Q8N196 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.96■□□□□ 0.47
SIX5Q8N196 AC004461.1-201ENST00000412461 403 ntBASIC17.96■□□□□ 0.47
SIX5Q8N196 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.96■□□□□ 0.47
SIX5Q8N196 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SIX5Q8N196 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.96■□□□□ 0.47
SIX5Q8N196 AL805961.1-202ENST00000641562 540 ntBASIC17.96■□□□□ 0.47
SIX5Q8N196 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SIX5Q8N196 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.96■□□□□ 0.47
SIX5Q8N196 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SIX5Q8N196 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
SIX5Q8N196 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SIX5Q8N196 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
SIX5Q8N196 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.96■□□□□ 0.47
SIX5Q8N196 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SIX5Q8N196 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
SIX5Q8N196 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SIX5Q8N196 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
SIX5Q8N196 AL353593.2-201ENST00000602529 1483 ntBASIC17.95■□□□□ 0.46
SIX5Q8N196 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SIX5Q8N196 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SIX5Q8N196 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.95■□□□□ 0.46
SIX5Q8N196 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SIX5Q8N196 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.95■□□□□ 0.46
SIX5Q8N196 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SIX5Q8N196 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
SIX5Q8N196 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
SIX5Q8N196 KLF4P1-201ENST00000412782 1185 ntBASIC17.95■□□□□ 0.46
SIX5Q8N196 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SIX5Q8N196 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.95■□□□□ 0.46
SIX5Q8N196 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC17.95■□□□□ 0.46
SIX5Q8N196 SIGLEC30P-201ENST00000455569 941 ntBASIC17.95■□□□□ 0.46
SIX5Q8N196 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SIX5Q8N196 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.95■□□□□ 0.46
SIX5Q8N196 AC190387.1-201ENST00000551683 408 ntBASIC17.95■□□□□ 0.46
SIX5Q8N196 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.95■□□□□ 0.46
SIX5Q8N196 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.95■□□□□ 0.46
SIX5Q8N196 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SIX5Q8N196 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SIX5Q8N196 GMCL1P1-201ENST00000463439 1581 ntBASIC17.95■□□□□ 0.46
SIX5Q8N196 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SIX5Q8N196 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
SIX5Q8N196 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SIX5Q8N196 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.95■□□□□ 0.46
SIX5Q8N196 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SIX5Q8N196 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
SIX5Q8N196 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.94■□□□□ 0.46
SIX5Q8N196 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SIX5Q8N196 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.94■□□□□ 0.46
SIX5Q8N196 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.94■□□□□ 0.46
SIX5Q8N196 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SIX5Q8N196 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SIX5Q8N196 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
SIX5Q8N196 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SIX5Q8N196 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SIX5Q8N196 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SIX5Q8N196 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.94■□□□□ 0.46
SIX5Q8N196 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
SIX5Q8N196 RHOQP3-201ENST00000437982 621 ntBASIC17.94■□□□□ 0.46
SIX5Q8N196 FAM86GP-201ENST00000448322 971 ntBASIC17.94■□□□□ 0.46
SIX5Q8N196 AC109322.1-201ENST00000524499 1264 ntBASIC17.94■□□□□ 0.46
SIX5Q8N196 AC069262.1-201ENST00000539058 672 ntBASIC17.94■□□□□ 0.46
SIX5Q8N196 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.94■□□□□ 0.46
SIX5Q8N196 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.94■□□□□ 0.46
SIX5Q8N196 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SIX5Q8N196 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.94■□□□□ 0.46
SIX5Q8N196 AC023141.13-201ENST00000604991 943 ntBASIC17.94■□□□□ 0.46
SIX5Q8N196 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.94■□□□□ 0.46
SIX5Q8N196 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
SIX5Q8N196 AC105339.1-204ENST00000636249 355 ntBASIC17.94■□□□□ 0.46
SIX5Q8N196 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
SIX5Q8N196 AC007064.4-201ENST00000637740 555 ntBASIC17.94■□□□□ 0.46
SIX5Q8N196 AC092902.6-201ENST00000641783 218 ntBASIC17.94■□□□□ 0.46
SIX5Q8N196 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SIX5Q8N196 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.94■□□□□ 0.46
SIX5Q8N196 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.94■□□□□ 0.46
SIX5Q8N196 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SIX5Q8N196 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
SIX5Q8N196 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
SIX5Q8N196 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.94■□□□□ 0.46
SIX5Q8N196 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
SIX5Q8N196 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SIX5Q8N196 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms