Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC24.71■■□□□ 1.55
UBR1Q8IWV7 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
UBR1Q8IWV7 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
UBR1Q8IWV7 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC24.71■■□□□ 1.55
UBR1Q8IWV7 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
UBR1Q8IWV7 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC24.71■■□□□ 1.55
UBR1Q8IWV7 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC24.71■■□□□ 1.55
UBR1Q8IWV7 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC24.71■■□□□ 1.55
UBR1Q8IWV7 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC24.71■■□□□ 1.55
UBR1Q8IWV7 LINC01225-203ENST00000563550 1244 ntBASIC24.71■■□□□ 1.55
UBR1Q8IWV7 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC24.71■■□□□ 1.55
UBR1Q8IWV7 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
UBR1Q8IWV7 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
UBR1Q8IWV7 AC046185.3-201ENST00000623228 1824 ntBASIC24.7■■□□□ 1.55
UBR1Q8IWV7 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC24.7■■□□□ 1.55
UBR1Q8IWV7 CROCCP3-202ENST00000420820 1947 ntBASIC24.7■■□□□ 1.55
UBR1Q8IWV7 CALY-202ENST00000368555 783 ntTSL 2 BASIC24.7■■□□□ 1.54
UBR1Q8IWV7 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC24.7■■□□□ 1.54
UBR1Q8IWV7 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC24.7■■□□□ 1.54
UBR1Q8IWV7 NOP2-220ENST00000545915 630 ntTSL 2 BASIC24.7■■□□□ 1.54
UBR1Q8IWV7 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC24.7■■□□□ 1.54
UBR1Q8IWV7 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
UBR1Q8IWV7 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC24.7■■□□□ 1.54
UBR1Q8IWV7 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
UBR1Q8IWV7 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC24.7■■□□□ 1.54
UBR1Q8IWV7 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC24.7■■□□□ 1.54
UBR1Q8IWV7 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC24.7■■□□□ 1.54
UBR1Q8IWV7 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
UBR1Q8IWV7 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC24.7■■□□□ 1.54
UBR1Q8IWV7 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.54
UBR1Q8IWV7 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC24.69■■□□□ 1.54
UBR1Q8IWV7 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC24.69■■□□□ 1.54
UBR1Q8IWV7 TSSK5P-201ENST00000423978 907 ntBASIC24.69■■□□□ 1.54
UBR1Q8IWV7 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC24.69■■□□□ 1.54
UBR1Q8IWV7 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC24.69■■□□□ 1.54
UBR1Q8IWV7 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
UBR1Q8IWV7 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC24.69■■□□□ 1.54
UBR1Q8IWV7 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC24.69■■□□□ 1.54
UBR1Q8IWV7 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
UBR1Q8IWV7 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC24.69■■□□□ 1.54
UBR1Q8IWV7 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
UBR1Q8IWV7 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC24.69■■□□□ 1.54
UBR1Q8IWV7 AMT-250ENST00000637682 1823 ntTSL 5 BASIC24.69■■□□□ 1.54
UBR1Q8IWV7 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
UBR1Q8IWV7 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC24.69■■□□□ 1.54
UBR1Q8IWV7 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
UBR1Q8IWV7 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
UBR1Q8IWV7 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
UBR1Q8IWV7 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
UBR1Q8IWV7 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
UBR1Q8IWV7 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC24.69■■□□□ 1.54
UBR1Q8IWV7 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC24.69■■□□□ 1.54
UBR1Q8IWV7 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC24.69■■□□□ 1.54
UBR1Q8IWV7 AL161645.1-201ENST00000622716 1255 ntBASIC24.69■■□□□ 1.54
UBR1Q8IWV7 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC24.69■■□□□ 1.54
UBR1Q8IWV7 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC24.68■■□□□ 1.54
UBR1Q8IWV7 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC24.68■■□□□ 1.54
UBR1Q8IWV7 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC24.68■■□□□ 1.54
UBR1Q8IWV7 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC24.68■■□□□ 1.54
UBR1Q8IWV7 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
UBR1Q8IWV7 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
UBR1Q8IWV7 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC24.68■■□□□ 1.54
UBR1Q8IWV7 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
UBR1Q8IWV7 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
UBR1Q8IWV7 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC24.68■■□□□ 1.54
UBR1Q8IWV7 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC24.68■■□□□ 1.54
UBR1Q8IWV7 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC24.68■■□□□ 1.54
UBR1Q8IWV7 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC24.68■■□□□ 1.54
UBR1Q8IWV7 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
UBR1Q8IWV7 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
UBR1Q8IWV7 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
UBR1Q8IWV7 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC24.68■■□□□ 1.54
UBR1Q8IWV7 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
UBR1Q8IWV7 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
UBR1Q8IWV7 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
UBR1Q8IWV7 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC24.67■■□□□ 1.54
UBR1Q8IWV7 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC24.67■■□□□ 1.54
UBR1Q8IWV7 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
UBR1Q8IWV7 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
UBR1Q8IWV7 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
UBR1Q8IWV7 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC24.67■■□□□ 1.54
UBR1Q8IWV7 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC24.67■■□□□ 1.54
UBR1Q8IWV7 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC24.67■■□□□ 1.54
UBR1Q8IWV7 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
UBR1Q8IWV7 SSH2-211ENST00000590153 570 ntTSL 4 BASIC24.67■■□□□ 1.54
UBR1Q8IWV7 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
UBR1Q8IWV7 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC24.67■■□□□ 1.54
UBR1Q8IWV7 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
UBR1Q8IWV7 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
UBR1Q8IWV7 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
UBR1Q8IWV7 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
UBR1Q8IWV7 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC24.67■■□□□ 1.54
UBR1Q8IWV7 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
UBR1Q8IWV7 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC24.67■■□□□ 1.54
UBR1Q8IWV7 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
UBR1Q8IWV7 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
UBR1Q8IWV7 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC24.67■■□□□ 1.54
UBR1Q8IWV7 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
UBR1Q8IWV7 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
UBR1Q8IWV7 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms