Protein–RNA interactions for Protein: Q68CL5

TPGS2, Tubulin polyglutamylase complex subunit 2, humanhuman

Predictions only

Length 300 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPGS2Q68CL5 AL590787.1-201ENST00000568856 1315 ntBASIC18.31■□□□□ 0.52
TPGS2Q68CL5 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TPGS2Q68CL5 AC104581.1-202ENST00000635932 2618 ntBASIC18.31■□□□□ 0.52
TPGS2Q68CL5 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TPGS2Q68CL5 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC18.31■□□□□ 0.52
TPGS2Q68CL5 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
TPGS2Q68CL5 IGLL3P-201ENST00000412472 434 ntBASIC18.31■□□□□ 0.52
TPGS2Q68CL5 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC18.31■□□□□ 0.52
TPGS2Q68CL5 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC18.31■□□□□ 0.52
TPGS2Q68CL5 MAL2-202ENST00000531508 892 ntTSL 3 BASIC18.31■□□□□ 0.52
TPGS2Q68CL5 AC096734.2-201ENST00000562054 433 ntBASIC18.31■□□□□ 0.52
TPGS2Q68CL5 AC005829.1-201ENST00000570002 483 ntBASIC18.31■□□□□ 0.52
TPGS2Q68CL5 AP001160.2-201ENST00000596071 487 ntBASIC18.31■□□□□ 0.52
TPGS2Q68CL5 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TPGS2Q68CL5 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TPGS2Q68CL5 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.31■□□□□ 0.52
TPGS2Q68CL5 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TPGS2Q68CL5 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TPGS2Q68CL5 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TPGS2Q68CL5 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.31■□□□□ 0.52
TPGS2Q68CL5 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TPGS2Q68CL5 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TPGS2Q68CL5 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TPGS2Q68CL5 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
TPGS2Q68CL5 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TPGS2Q68CL5 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
TPGS2Q68CL5 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TPGS2Q68CL5 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TPGS2Q68CL5 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
TPGS2Q68CL5 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TPGS2Q68CL5 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
TPGS2Q68CL5 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TPGS2Q68CL5 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TPGS2Q68CL5 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TPGS2Q68CL5 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TPGS2Q68CL5 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TPGS2Q68CL5 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
TPGS2Q68CL5 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TPGS2Q68CL5 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TPGS2Q68CL5 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
TPGS2Q68CL5 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TPGS2Q68CL5 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
TPGS2Q68CL5 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TPGS2Q68CL5 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC18.3■□□□□ 0.52
TPGS2Q68CL5 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC18.3■□□□□ 0.52
TPGS2Q68CL5 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC18.3■□□□□ 0.52
TPGS2Q68CL5 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.3■□□□□ 0.52
TPGS2Q68CL5 AC018845.2-201ENST00000568326 409 ntBASIC18.3■□□□□ 0.52
TPGS2Q68CL5 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18.3■□□□□ 0.52
TPGS2Q68CL5 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC18.3■□□□□ 0.52
TPGS2Q68CL5 AL139327.4-201ENST00000612362 153 ntBASIC18.3■□□□□ 0.52
TPGS2Q68CL5 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC18.3■□□□□ 0.52
TPGS2Q68CL5 AC134684.3-201ENST00000641758 218 ntBASIC18.3■□□□□ 0.52
TPGS2Q68CL5 AC092865.6-201ENST00000642101 219 ntBASIC18.3■□□□□ 0.52
TPGS2Q68CL5 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TPGS2Q68CL5 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TPGS2Q68CL5 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.3■□□□□ 0.52
TPGS2Q68CL5 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.3■□□□□ 0.52
TPGS2Q68CL5 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TPGS2Q68CL5 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TPGS2Q68CL5 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.3■□□□□ 0.52
TPGS2Q68CL5 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
TPGS2Q68CL5 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TPGS2Q68CL5 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
TPGS2Q68CL5 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TPGS2Q68CL5 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
TPGS2Q68CL5 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TPGS2Q68CL5 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TPGS2Q68CL5 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TPGS2Q68CL5 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TPGS2Q68CL5 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TPGS2Q68CL5 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TPGS2Q68CL5 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.29■□□□□ 0.52
TPGS2Q68CL5 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC18.29■□□□□ 0.52
TPGS2Q68CL5 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
TPGS2Q68CL5 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TPGS2Q68CL5 AL135999.2-201ENST00000622438 1686 ntBASIC18.29■□□□□ 0.52
TPGS2Q68CL5 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.29■□□□□ 0.52
TPGS2Q68CL5 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TPGS2Q68CL5 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC18.29■□□□□ 0.52
TPGS2Q68CL5 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC18.29■□□□□ 0.52
TPGS2Q68CL5 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC18.29■□□□□ 0.52
TPGS2Q68CL5 OR7E47P-204ENST00000575924 449 ntBASIC18.29■□□□□ 0.52
TPGS2Q68CL5 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.29■□□□□ 0.52
TPGS2Q68CL5 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TPGS2Q68CL5 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TPGS2Q68CL5 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.29■□□□□ 0.52
TPGS2Q68CL5 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
TPGS2Q68CL5 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
TPGS2Q68CL5 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TPGS2Q68CL5 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TPGS2Q68CL5 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TPGS2Q68CL5 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TPGS2Q68CL5 PI4KAP1-204ENST00000612579 1703 ntBASIC18.29■□□□□ 0.52
TPGS2Q68CL5 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TPGS2Q68CL5 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TPGS2Q68CL5 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TPGS2Q68CL5 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.28■□□□□ 0.52
TPGS2Q68CL5 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
TPGS2Q68CL5 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms