Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 APOC3-202ENST00000375345 604 ntTSL 5 BASIC18.89■□□□□ 0.61
PRPF38BQ5VTL8 FXNP2-201ENST00000411625 547 ntBASIC18.89■□□□□ 0.61
PRPF38BQ5VTL8 AC104989.1-201ENST00000519711 778 ntBASIC18.89■□□□□ 0.61
PRPF38BQ5VTL8 FADS2-212ENST00000522639 360 ntTSL 5 BASIC18.89■□□□□ 0.61
PRPF38BQ5VTL8 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC18.89■□□□□ 0.61
PRPF38BQ5VTL8 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC18.89■□□□□ 0.61
PRPF38BQ5VTL8 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
PRPF38BQ5VTL8 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.89■□□□□ 0.61
PRPF38BQ5VTL8 FADS2-215ENST00000574708 385 ntTSL 3 BASIC18.89■□□□□ 0.61
PRPF38BQ5VTL8 CD7-202ENST00000578509 925 ntTSL 3 BASIC18.89■□□□□ 0.61
PRPF38BQ5VTL8 AL161645.1-201ENST00000622716 1255 ntBASIC18.89■□□□□ 0.61
PRPF38BQ5VTL8 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PRPF38BQ5VTL8 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRPF38BQ5VTL8 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PRPF38BQ5VTL8 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
PRPF38BQ5VTL8 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRPF38BQ5VTL8 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRPF38BQ5VTL8 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRPF38BQ5VTL8 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRPF38BQ5VTL8 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PRPF38BQ5VTL8 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
PRPF38BQ5VTL8 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
PRPF38BQ5VTL8 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.88■□□□□ 0.61
PRPF38BQ5VTL8 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PRPF38BQ5VTL8 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
PRPF38BQ5VTL8 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PRPF38BQ5VTL8 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
PRPF38BQ5VTL8 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PRPF38BQ5VTL8 BOLA2P3-201ENST00000404566 256 ntBASIC18.88■□□□□ 0.61
PRPF38BQ5VTL8 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC18.88■□□□□ 0.61
PRPF38BQ5VTL8 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC18.88■□□□□ 0.61
PRPF38BQ5VTL8 FUZ-207ENST00000526575 482 ntTSL 4 BASIC18.88■□□□□ 0.61
PRPF38BQ5VTL8 AGER-214ENST00000538695 487 ntTSL 2 BASIC18.88■□□□□ 0.61
PRPF38BQ5VTL8 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PRPF38BQ5VTL8 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PRPF38BQ5VTL8 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
PRPF38BQ5VTL8 TECR-220ENST00000600083 1204 ntTSL 2 BASIC18.88■□□□□ 0.61
PRPF38BQ5VTL8 AC008494.3-201ENST00000606615 944 ntBASIC18.88■□□□□ 0.61
PRPF38BQ5VTL8 AC026740.1-201ENST00000607068 791 ntBASIC18.88■□□□□ 0.61
PRPF38BQ5VTL8 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PRPF38BQ5VTL8 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.88■□□□□ 0.61
PRPF38BQ5VTL8 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PRPF38BQ5VTL8 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
PRPF38BQ5VTL8 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
PRPF38BQ5VTL8 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC18.88■□□□□ 0.61
PRPF38BQ5VTL8 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
PRPF38BQ5VTL8 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PRPF38BQ5VTL8 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PRPF38BQ5VTL8 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PRPF38BQ5VTL8 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PRPF38BQ5VTL8 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
PRPF38BQ5VTL8 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PRPF38BQ5VTL8 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
PRPF38BQ5VTL8 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.87■□□□□ 0.61
PRPF38BQ5VTL8 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
PRPF38BQ5VTL8 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PRPF38BQ5VTL8 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PRPF38BQ5VTL8 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PRPF38BQ5VTL8 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.87■□□□□ 0.61
PRPF38BQ5VTL8 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PRPF38BQ5VTL8 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.87■□□□□ 0.61
PRPF38BQ5VTL8 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PRPF38BQ5VTL8 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PRPF38BQ5VTL8 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC18.87■□□□□ 0.61
PRPF38BQ5VTL8 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PRPF38BQ5VTL8 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
PRPF38BQ5VTL8 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC18.87■□□□□ 0.61
PRPF38BQ5VTL8 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PRPF38BQ5VTL8 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
PRPF38BQ5VTL8 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC18.87■□□□□ 0.61
PRPF38BQ5VTL8 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC18.87■□□□□ 0.61
PRPF38BQ5VTL8 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC18.87■□□□□ 0.61
PRPF38BQ5VTL8 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PRPF38BQ5VTL8 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
PRPF38BQ5VTL8 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PRPF38BQ5VTL8 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PRPF38BQ5VTL8 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.87■□□□□ 0.61
PRPF38BQ5VTL8 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PRPF38BQ5VTL8 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.87■□□□□ 0.61
PRPF38BQ5VTL8 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.87■□□□□ 0.61
PRPF38BQ5VTL8 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC18.87■□□□□ 0.61
PRPF38BQ5VTL8 AL583810.1-201ENST00000553344 1045 ntBASIC18.87■□□□□ 0.61
PRPF38BQ5VTL8 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC18.87■□□□□ 0.61
PRPF38BQ5VTL8 WASH4P-201ENST00000564273 1246 ntBASIC18.87■□□□□ 0.61
PRPF38BQ5VTL8 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
PRPF38BQ5VTL8 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC18.87■□□□□ 0.61
PRPF38BQ5VTL8 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
PRPF38BQ5VTL8 AC008738.7-201ENST00000609744 511 ntBASIC18.87■□□□□ 0.61
PRPF38BQ5VTL8 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PRPF38BQ5VTL8 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PRPF38BQ5VTL8 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
PRPF38BQ5VTL8 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
PRPF38BQ5VTL8 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PRPF38BQ5VTL8 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PRPF38BQ5VTL8 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PRPF38BQ5VTL8 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.86■□□□□ 0.61
PRPF38BQ5VTL8 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PRPF38BQ5VTL8 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PRPF38BQ5VTL8 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PRPF38BQ5VTL8 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms