Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
COL13A1Q5TAT6 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
COL13A1Q5TAT6 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
COL13A1Q5TAT6 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
COL13A1Q5TAT6 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
COL13A1Q5TAT6 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
COL13A1Q5TAT6 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
COL13A1Q5TAT6 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
COL13A1Q5TAT6 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
COL13A1Q5TAT6 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
COL13A1Q5TAT6 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC19.52■□□□□ 0.72
COL13A1Q5TAT6 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC19.52■□□□□ 0.72
COL13A1Q5TAT6 MYCLP2-201ENST00000449268 967 ntBASIC19.52■□□□□ 0.72
COL13A1Q5TAT6 FO681548.1-201ENST00000455617 1132 ntBASIC19.52■□□□□ 0.72
COL13A1Q5TAT6 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC19.52■□□□□ 0.72
COL13A1Q5TAT6 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC19.52■□□□□ 0.72
COL13A1Q5TAT6 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC19.52■□□□□ 0.72
COL13A1Q5TAT6 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
COL13A1Q5TAT6 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC19.52■□□□□ 0.71
COL13A1Q5TAT6 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL13A1Q5TAT6 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC19.51■□□□□ 0.71
COL13A1Q5TAT6 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.51■□□□□ 0.71
COL13A1Q5TAT6 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COL13A1Q5TAT6 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
COL13A1Q5TAT6 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL13A1Q5TAT6 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL13A1Q5TAT6 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC19.51■□□□□ 0.71
COL13A1Q5TAT6 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC19.51■□□□□ 0.71
COL13A1Q5TAT6 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
COL13A1Q5TAT6 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC19.51■□□□□ 0.71
COL13A1Q5TAT6 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC19.51■□□□□ 0.71
COL13A1Q5TAT6 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
COL13A1Q5TAT6 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COL13A1Q5TAT6 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC19.51■□□□□ 0.71
COL13A1Q5TAT6 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL13A1Q5TAT6 CSF2RBP1-201ENST00000447905 391 ntBASIC19.51■□□□□ 0.71
COL13A1Q5TAT6 KLF2P4-201ENST00000451959 1225 ntBASIC19.51■□□□□ 0.71
COL13A1Q5TAT6 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC19.51■□□□□ 0.71
COL13A1Q5TAT6 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
COL13A1Q5TAT6 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC19.51■□□□□ 0.71
COL13A1Q5TAT6 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC19.51■□□□□ 0.71
COL13A1Q5TAT6 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC19.51■□□□□ 0.71
COL13A1Q5TAT6 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC19.51■□□□□ 0.71
COL13A1Q5TAT6 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COL13A1Q5TAT6 SLC7A15P-201ENST00000424028 1363 ntBASIC19.51■□□□□ 0.71
COL13A1Q5TAT6 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
COL13A1Q5TAT6 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC19.51■□□□□ 0.71
COL13A1Q5TAT6 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COL13A1Q5TAT6 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
COL13A1Q5TAT6 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL13A1Q5TAT6 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL13A1Q5TAT6 PDIA3P1-201ENST00000471856 1510 ntBASIC19.51■□□□□ 0.71
COL13A1Q5TAT6 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COL13A1Q5TAT6 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
COL13A1Q5TAT6 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL13A1Q5TAT6 AC026310.3-201ENST00000625186 2373 ntBASIC19.5■□□□□ 0.71
COL13A1Q5TAT6 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
COL13A1Q5TAT6 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.5■□□□□ 0.71
COL13A1Q5TAT6 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.5■□□□□ 0.71
COL13A1Q5TAT6 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL13A1Q5TAT6 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
COL13A1Q5TAT6 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL13A1Q5TAT6 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
COL13A1Q5TAT6 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL13A1Q5TAT6 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC19.5■□□□□ 0.71
COL13A1Q5TAT6 KRT43P-201ENST00000434019 910 ntBASIC19.5■□□□□ 0.71
COL13A1Q5TAT6 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC19.5■□□□□ 0.71
COL13A1Q5TAT6 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL13A1Q5TAT6 ELK1P1-201ENST00000485699 580 ntBASIC19.5■□□□□ 0.71
COL13A1Q5TAT6 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC19.5■□□□□ 0.71
COL13A1Q5TAT6 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC19.5■□□□□ 0.71
COL13A1Q5TAT6 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC19.5■□□□□ 0.71
COL13A1Q5TAT6 AC027307.2-201ENST00000591252 911 ntBASIC19.5■□□□□ 0.71
COL13A1Q5TAT6 AC008267.7-201ENST00000624570 1194 ntBASIC19.5■□□□□ 0.71
COL13A1Q5TAT6 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.5■□□□□ 0.71
COL13A1Q5TAT6 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL13A1Q5TAT6 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC19.5■□□□□ 0.71
COL13A1Q5TAT6 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL13A1Q5TAT6 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC19.5■□□□□ 0.71
COL13A1Q5TAT6 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.5■□□□□ 0.71
COL13A1Q5TAT6 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.5■□□□□ 0.71
COL13A1Q5TAT6 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
COL13A1Q5TAT6 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL13A1Q5TAT6 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL13A1Q5TAT6 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL13A1Q5TAT6 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.49■□□□□ 0.71
COL13A1Q5TAT6 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
COL13A1Q5TAT6 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
COL13A1Q5TAT6 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
COL13A1Q5TAT6 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.49■□□□□ 0.71
COL13A1Q5TAT6 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
COL13A1Q5TAT6 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL13A1Q5TAT6 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
COL13A1Q5TAT6 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL13A1Q5TAT6 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL13A1Q5TAT6 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
COL13A1Q5TAT6 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL13A1Q5TAT6 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
COL13A1Q5TAT6 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC19.49■□□□□ 0.71
COL13A1Q5TAT6 FAM21FP-201ENST00000426241 1131 ntBASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms