Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
SHROOM1Q2M3G4 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC20.43■□□□□ 0.86
SHROOM1Q2M3G4 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC20.43■□□□□ 0.86
SHROOM1Q2M3G4 URGCP-206ENST00000446958 365 ntTSL 2 BASIC20.43■□□□□ 0.86
SHROOM1Q2M3G4 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC20.43■□□□□ 0.86
SHROOM1Q2M3G4 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC20.43■□□□□ 0.86
SHROOM1Q2M3G4 CYB561-216ENST00000582297 897 ntTSL 3 BASIC20.43■□□□□ 0.86
SHROOM1Q2M3G4 AL596442.2-201ENST00000610240 980 ntBASIC20.43■□□□□ 0.86
SHROOM1Q2M3G4 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
SHROOM1Q2M3G4 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SHROOM1Q2M3G4 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC20.43■□□□□ 0.86
SHROOM1Q2M3G4 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC20.43■□□□□ 0.86
SHROOM1Q2M3G4 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
SHROOM1Q2M3G4 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
SHROOM1Q2M3G4 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SHROOM1Q2M3G4 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SHROOM1Q2M3G4 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC20.43■□□□□ 0.86
SHROOM1Q2M3G4 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SHROOM1Q2M3G4 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SHROOM1Q2M3G4 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC20.42■□□□□ 0.86
SHROOM1Q2M3G4 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SHROOM1Q2M3G4 AC012317.2-201ENST00000623305 2251 ntBASIC20.42■□□□□ 0.86
SHROOM1Q2M3G4 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
SHROOM1Q2M3G4 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
SHROOM1Q2M3G4 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
SHROOM1Q2M3G4 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
SHROOM1Q2M3G4 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
SHROOM1Q2M3G4 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.42■□□□□ 0.86
SHROOM1Q2M3G4 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.42■□□□□ 0.86
SHROOM1Q2M3G4 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
SHROOM1Q2M3G4 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SHROOM1Q2M3G4 HNRNPA1P28-201ENST00000424481 961 ntBASIC20.42■□□□□ 0.86
SHROOM1Q2M3G4 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC20.42■□□□□ 0.86
SHROOM1Q2M3G4 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC20.42■□□□□ 0.86
SHROOM1Q2M3G4 MIR4469-201ENST00000583919 79 ntBASIC20.42■□□□□ 0.86
SHROOM1Q2M3G4 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC20.42■□□□□ 0.86
SHROOM1Q2M3G4 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC20.42■□□□□ 0.86
SHROOM1Q2M3G4 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SHROOM1Q2M3G4 MTDHP5-201ENST00000598980 586 ntBASIC20.42■□□□□ 0.86
SHROOM1Q2M3G4 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SHROOM1Q2M3G4 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC20.42■□□□□ 0.86
SHROOM1Q2M3G4 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SHROOM1Q2M3G4 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC20.42■□□□□ 0.86
SHROOM1Q2M3G4 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SHROOM1Q2M3G4 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC20.41■□□□□ 0.86
SHROOM1Q2M3G4 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC20.41■□□□□ 0.86
SHROOM1Q2M3G4 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SHROOM1Q2M3G4 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC20.41■□□□□ 0.86
SHROOM1Q2M3G4 AMT-250ENST00000637682 1823 ntTSL 5 BASIC20.41■□□□□ 0.86
SHROOM1Q2M3G4 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
SHROOM1Q2M3G4 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
SHROOM1Q2M3G4 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SHROOM1Q2M3G4 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SHROOM1Q2M3G4 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC20.41■□□□□ 0.86
SHROOM1Q2M3G4 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SHROOM1Q2M3G4 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SHROOM1Q2M3G4 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC20.41■□□□□ 0.86
SHROOM1Q2M3G4 PRSS29P-201ENST00000440800 595 ntBASIC20.41■□□□□ 0.86
SHROOM1Q2M3G4 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC20.41■□□□□ 0.86
SHROOM1Q2M3G4 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
SHROOM1Q2M3G4 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC20.41■□□□□ 0.86
SHROOM1Q2M3G4 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SHROOM1Q2M3G4 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SHROOM1Q2M3G4 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
SHROOM1Q2M3G4 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC20.41■□□□□ 0.86
SHROOM1Q2M3G4 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
SHROOM1Q2M3G4 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC20.41■□□□□ 0.86
SHROOM1Q2M3G4 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.41■□□□□ 0.86
SHROOM1Q2M3G4 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
SHROOM1Q2M3G4 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SHROOM1Q2M3G4 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC20.4■□□□□ 0.86
SHROOM1Q2M3G4 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SHROOM1Q2M3G4 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SHROOM1Q2M3G4 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.4■□□□□ 0.86
SHROOM1Q2M3G4 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SHROOM1Q2M3G4 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC20.4■□□□□ 0.86
SHROOM1Q2M3G4 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SHROOM1Q2M3G4 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
SHROOM1Q2M3G4 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC20.4■□□□□ 0.86
SHROOM1Q2M3G4 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SHROOM1Q2M3G4 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SHROOM1Q2M3G4 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC20.4■□□□□ 0.86
SHROOM1Q2M3G4 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SHROOM1Q2M3G4 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC20.4■□□□□ 0.86
SHROOM1Q2M3G4 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
SHROOM1Q2M3G4 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
SHROOM1Q2M3G4 AL590787.1-201ENST00000568856 1315 ntBASIC20.4■□□□□ 0.86
SHROOM1Q2M3G4 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC20.4■□□□□ 0.86
SHROOM1Q2M3G4 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20.4■□□□□ 0.86
SHROOM1Q2M3G4 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC20.4■□□□□ 0.86
SHROOM1Q2M3G4 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SHROOM1Q2M3G4 ABALON-201ENST00000629058 1903 ntBASIC20.4■□□□□ 0.86
SHROOM1Q2M3G4 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC20.4■□□□□ 0.86
SHROOM1Q2M3G4 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC20.39■□□□□ 0.86
SHROOM1Q2M3G4 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SHROOM1Q2M3G4 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SHROOM1Q2M3G4 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
SHROOM1Q2M3G4 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SHROOM1Q2M3G4 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
SHROOM1Q2M3G4 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms