Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC14.55□□□□□ -0.08
RIPPLY3P57055 DPP3P2-201ENST00000416030 1696 ntBASIC14.55□□□□□ -0.08
RIPPLY3P57055 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RIPPLY3P57055 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RIPPLY3P57055 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
RIPPLY3P57055 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RIPPLY3P57055 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RIPPLY3P57055 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC14.55□□□□□ -0.08
RIPPLY3P57055 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RIPPLY3P57055 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RIPPLY3P57055 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RIPPLY3P57055 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RIPPLY3P57055 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC14.55□□□□□ -0.08
RIPPLY3P57055 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RIPPLY3P57055 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.55□□□□□ -0.08
RIPPLY3P57055 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
RIPPLY3P57055 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.55□□□□□ -0.08
RIPPLY3P57055 REEP1-209ENST00000541910 969 ntTSL 2 BASIC14.55□□□□□ -0.08
RIPPLY3P57055 KRT19P2-202ENST00000557173 1012 ntBASIC14.55□□□□□ -0.08
RIPPLY3P57055 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.55□□□□□ -0.08
RIPPLY3P57055 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC14.55□□□□□ -0.08
RIPPLY3P57055 MIR6787-201ENST00000616675 61 ntBASIC14.55□□□□□ -0.08
RIPPLY3P57055 AL162274.1-201ENST00000617191 1098 ntBASIC14.55□□□□□ -0.08
RIPPLY3P57055 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.55□□□□□ -0.08
RIPPLY3P57055 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.55□□□□□ -0.08
RIPPLY3P57055 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
RIPPLY3P57055 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
RIPPLY3P57055 BCAR1-209ENST00000546196 1340 ntBASIC14.55□□□□□ -0.08
RIPPLY3P57055 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
RIPPLY3P57055 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC14.55□□□□□ -0.08
RIPPLY3P57055 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RIPPLY3P57055 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
RIPPLY3P57055 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RIPPLY3P57055 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC14.55□□□□□ -0.08
RIPPLY3P57055 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
RIPPLY3P57055 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC14.55□□□□□ -0.08
RIPPLY3P57055 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
RIPPLY3P57055 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC14.55□□□□□ -0.08
RIPPLY3P57055 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
RIPPLY3P57055 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RIPPLY3P57055 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RIPPLY3P57055 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RIPPLY3P57055 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RIPPLY3P57055 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC14.54□□□□□ -0.08
RIPPLY3P57055 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RIPPLY3P57055 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
RIPPLY3P57055 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RIPPLY3P57055 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RIPPLY3P57055 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC14.54□□□□□ -0.08
RIPPLY3P57055 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC14.54□□□□□ -0.08
RIPPLY3P57055 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC14.54□□□□□ -0.08
RIPPLY3P57055 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
RIPPLY3P57055 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
RIPPLY3P57055 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RIPPLY3P57055 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RIPPLY3P57055 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RIPPLY3P57055 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RIPPLY3P57055 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.54□□□□□ -0.08
RIPPLY3P57055 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RIPPLY3P57055 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.54□□□□□ -0.08
RIPPLY3P57055 AL627223.1-201ENST00000416693 442 ntBASIC14.54□□□□□ -0.08
RIPPLY3P57055 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
RIPPLY3P57055 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.54□□□□□ -0.08
RIPPLY3P57055 AC108073.2-201ENST00000464002 357 ntBASIC14.54□□□□□ -0.08
RIPPLY3P57055 AC125807.1-201ENST00000483097 614 ntBASIC14.54□□□□□ -0.08
RIPPLY3P57055 GIMAP3P-201ENST00000495150 836 ntBASIC14.54□□□□□ -0.08
RIPPLY3P57055 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
RIPPLY3P57055 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC14.54□□□□□ -0.08
RIPPLY3P57055 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC14.54□□□□□ -0.08
RIPPLY3P57055 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RIPPLY3P57055 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC14.54□□□□□ -0.08
RIPPLY3P57055 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC14.54□□□□□ -0.08
RIPPLY3P57055 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.54□□□□□ -0.08
RIPPLY3P57055 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.54□□□□□ -0.08
RIPPLY3P57055 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.54□□□□□ -0.08
RIPPLY3P57055 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC14.54□□□□□ -0.08
RIPPLY3P57055 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RIPPLY3P57055 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RIPPLY3P57055 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC14.54□□□□□ -0.08
RIPPLY3P57055 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC14.54□□□□□ -0.08
RIPPLY3P57055 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RIPPLY3P57055 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RIPPLY3P57055 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RIPPLY3P57055 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
RIPPLY3P57055 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RIPPLY3P57055 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RIPPLY3P57055 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
RIPPLY3P57055 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC14.53□□□□□ -0.08
RIPPLY3P57055 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC14.53□□□□□ -0.08
RIPPLY3P57055 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RIPPLY3P57055 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
RIPPLY3P57055 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RIPPLY3P57055 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RIPPLY3P57055 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RIPPLY3P57055 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
RIPPLY3P57055 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RIPPLY3P57055 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC14.53□□□□□ -0.08
RIPPLY3P57055 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RIPPLY3P57055 KRT8P44-201ENST00000441609 1350 ntBASIC14.53□□□□□ -0.08
RIPPLY3P57055 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms