Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN20P56880 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CLDN20P56880 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.15■□□□□ 0.18
CLDN20P56880 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.15■□□□□ 0.18
CLDN20P56880 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
CLDN20P56880 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN20P56880 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
CLDN20P56880 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN20P56880 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN20P56880 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN20P56880 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.15■□□□□ 0.18
CLDN20P56880 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
CLDN20P56880 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
CLDN20P56880 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.18
CLDN20P56880 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.14■□□□□ 0.17
CLDN20P56880 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN20P56880 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CLDN20P56880 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN20P56880 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.14■□□□□ 0.17
CLDN20P56880 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN20P56880 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN20P56880 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN20P56880 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN20P56880 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN20P56880 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN20P56880 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.14■□□□□ 0.17
CLDN20P56880 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CLDN20P56880 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN20P56880 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN20P56880 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
CLDN20P56880 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN20P56880 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
CLDN20P56880 IGHV3-47-201ENST00000425060 335 ntBASIC16.14■□□□□ 0.17
CLDN20P56880 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CLDN20P56880 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.14■□□□□ 0.17
CLDN20P56880 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.14■□□□□ 0.17
CLDN20P56880 AC112698.1-201ENST00000510299 916 ntBASIC16.14■□□□□ 0.17
CLDN20P56880 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.14■□□□□ 0.17
CLDN20P56880 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.14■□□□□ 0.17
CLDN20P56880 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.14■□□□□ 0.17
CLDN20P56880 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN20P56880 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.14■□□□□ 0.17
CLDN20P56880 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN20P56880 AC011676.5-201ENST00000624864 2660 ntBASIC16.14■□□□□ 0.17
CLDN20P56880 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN20P56880 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN20P56880 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CLDN20P56880 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.14■□□□□ 0.17
CLDN20P56880 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN20P56880 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CLDN20P56880 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN20P56880 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.14■□□□□ 0.17
CLDN20P56880 NSUN5P1-202ENST00000421140 1535 ntBASIC16.14■□□□□ 0.17
CLDN20P56880 NSUN5P2-203ENST00000457352 1529 ntBASIC16.14■□□□□ 0.17
CLDN20P56880 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
CLDN20P56880 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN20P56880 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN20P56880 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN20P56880 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CLDN20P56880 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.13■□□□□ 0.17
CLDN20P56880 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN20P56880 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN20P56880 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN20P56880 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN20P56880 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN20P56880 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
CLDN20P56880 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CLDN20P56880 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN20P56880 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.13■□□□□ 0.17
CLDN20P56880 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.13■□□□□ 0.17
CLDN20P56880 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.13■□□□□ 0.17
CLDN20P56880 AC005336.2-201ENST00000593183 939 ntBASIC16.13■□□□□ 0.17
CLDN20P56880 AC099336.1-202ENST00000602961 463 ntBASIC16.13■□□□□ 0.17
CLDN20P56880 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CLDN20P56880 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CLDN20P56880 AC022211.2-201ENST00000585075 2527 ntBASIC16.13■□□□□ 0.17
CLDN20P56880 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CLDN20P56880 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN20P56880 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CLDN20P56880 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CLDN20P56880 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN20P56880 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
CLDN20P56880 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN20P56880 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
CLDN20P56880 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN20P56880 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN20P56880 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.12■□□□□ 0.17
CLDN20P56880 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN20P56880 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.12■□□□□ 0.17
CLDN20P56880 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.12■□□□□ 0.17
CLDN20P56880 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN20P56880 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.12■□□□□ 0.17
CLDN20P56880 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN20P56880 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
CLDN20P56880 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN20P56880 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN20P56880 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.12■□□□□ 0.17
CLDN20P56880 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN20P56880 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN20P56880 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms