Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LIMK2P53671 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LIMK2P53671 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.74■□□□□ 0.43
LIMK2P53671 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.74■□□□□ 0.43
LIMK2P53671 RN7SL510P-201ENST00000581311 263 ntBASIC17.74■□□□□ 0.43
LIMK2P53671 AC090616.6-201ENST00000582640 721 ntBASIC17.74■□□□□ 0.43
LIMK2P53671 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LIMK2P53671 AL390719.2-201ENST00000606993 987 ntBASIC17.74■□□□□ 0.43
LIMK2P53671 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.74■□□□□ 0.43
LIMK2P53671 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.74■□□□□ 0.43
LIMK2P53671 AC022211.2-201ENST00000585075 2527 ntBASIC17.74■□□□□ 0.43
LIMK2P53671 OR6D1P-202ENST00000641007 5290 ntBASIC17.74■□□□□ 0.43
LIMK2P53671 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LIMK2P53671 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LIMK2P53671 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LIMK2P53671 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
LIMK2P53671 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
LIMK2P53671 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
LIMK2P53671 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
LIMK2P53671 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
LIMK2P53671 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LIMK2P53671 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LIMK2P53671 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LIMK2P53671 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LIMK2P53671 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LIMK2P53671 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
LIMK2P53671 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LIMK2P53671 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LIMK2P53671 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
LIMK2P53671 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
LIMK2P53671 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.73■□□□□ 0.43
LIMK2P53671 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LIMK2P53671 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
LIMK2P53671 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LIMK2P53671 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LIMK2P53671 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.73■□□□□ 0.43
LIMK2P53671 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.73■□□□□ 0.43
LIMK2P53671 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.73■□□□□ 0.43
LIMK2P53671 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
LIMK2P53671 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.73■□□□□ 0.43
LIMK2P53671 LINC00265-3P-201ENST00000447588 903 ntBASIC17.73■□□□□ 0.43
LIMK2P53671 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.73■□□□□ 0.43
LIMK2P53671 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.73■□□□□ 0.43
LIMK2P53671 AC009154.2-201ENST00000621177 724 ntBASIC17.73■□□□□ 0.43
LIMK2P53671 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LIMK2P53671 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.73■□□□□ 0.43
LIMK2P53671 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
LIMK2P53671 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LIMK2P53671 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.73■□□□□ 0.43
LIMK2P53671 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LIMK2P53671 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LIMK2P53671 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LIMK2P53671 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
LIMK2P53671 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LIMK2P53671 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
LIMK2P53671 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LIMK2P53671 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
LIMK2P53671 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LIMK2P53671 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.73■□□□□ 0.43
LIMK2P53671 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.72■□□□□ 0.43
LIMK2P53671 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.72■□□□□ 0.43
LIMK2P53671 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
LIMK2P53671 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
LIMK2P53671 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LIMK2P53671 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
LIMK2P53671 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
LIMK2P53671 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
LIMK2P53671 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.72■□□□□ 0.43
LIMK2P53671 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LIMK2P53671 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LIMK2P53671 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
LIMK2P53671 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
LIMK2P53671 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LIMK2P53671 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LIMK2P53671 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LIMK2P53671 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.72■□□□□ 0.43
LIMK2P53671 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.72■□□□□ 0.43
LIMK2P53671 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.72■□□□□ 0.43
LIMK2P53671 AP000867.3-201ENST00000524675 377 ntBASIC17.72■□□□□ 0.43
LIMK2P53671 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.72■□□□□ 0.43
LIMK2P53671 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.72■□□□□ 0.43
LIMK2P53671 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.72■□□□□ 0.43
LIMK2P53671 GPR32P1-201ENST00000601788 811 ntBASIC17.72■□□□□ 0.43
LIMK2P53671 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.72■□□□□ 0.43
LIMK2P53671 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.72■□□□□ 0.43
LIMK2P53671 AC004263.2-201ENST00000617183 678 ntBASIC17.72■□□□□ 0.43
LIMK2P53671 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.72■□□□□ 0.43
LIMK2P53671 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LIMK2P53671 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
LIMK2P53671 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
LIMK2P53671 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
LIMK2P53671 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
LIMK2P53671 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LIMK2P53671 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LIMK2P53671 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LIMK2P53671 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.72■□□□□ 0.43
LIMK2P53671 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LIMK2P53671 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LIMK2P53671 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LIMK2P53671 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms