Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.712e-9■□□□□ 10.4
NCBP2P52298 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.32■□□□□ 0.683e-7■□□□□ 10.4
NCBP2P52298 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.19■□□□□ 0.662e-9■□□□□ 10.4
NCBP2P52298 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.05■□□□□ 0.643e-7■□□□□ 10.4
NCBP2P52298 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.61■□□□□ 0.572e-9■□□□□ 10.4
NCBP2P52298 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.552e-9■□□□□ 10.4
NCBP2P52298 SEPT2-210ENST00000420786 539 ntTSL 518.4■□□□□ 0.543e-7■□□□□ 10.4
NCBP2P52298 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.522e-9■□□□□ 10.4
NCBP2P52298 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.29■□□□□ 0.522e-9■□□□□ 10.4
NCBP2P52298 ANAPC4-206ENST00000505991 595 ntTSL 518.26■□□□□ 0.512e-9■□□□□ 10.4
NCBP2P52298 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.512e-9■□□□□ 10.4
NCBP2P52298 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.25■□□□□ 0.513e-7■□□□□ 10.4
NCBP2P52298 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.513e-7■□□□□ 10.4
NCBP2P52298 DDX55-207ENST00000540763 799 ntTSL 318.04■□□□□ 0.483e-7■□□□□ 10.4
NCBP2P52298 E4F1-207ENST00000565413 940 ntTSL 317.91■□□□□ 0.463e-7■□□□□ 10.4
NCBP2P52298 DDX55-211ENST00000544429 574 ntTSL 417.67■□□□□ 0.423e-7■□□□□ 10.4
NCBP2P52298 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.412e-9■□□□□ 10.4
NCBP2P52298 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.353e-7■□□□□ 10.4
NCBP2P52298 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.353e-7■□□□□ 10.4
NCBP2P52298 NT5DC2-215ENST00000492555 2004 ntTSL 1 (best)16.94■□□□□ 0.35e-9■□□□□ 10.4
NCBP2P52298 DDX55-204ENST00000536079 765 ntTSL 216.55■□□□□ 0.243e-7■□□□□ 10.4
NCBP2P52298 NUMA1-213ENST00000537217 2331 ntAPPRIS ALT2 TSL 1 (best)16.54■□□□□ 0.243e-7■□□□□ 10.4
NCBP2P52298 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.53■□□□□ 0.243e-7■□□□□ 10.4
NCBP2P52298 POGLUT1-207ENST00000486607 1420 ntTSL 216.47■□□□□ 0.233e-7■□□□□ 10.4
NCBP2P52298 GTF2IRD2B-209ENST00000620662 1298 ntTSL 216.3■□□□□ 0.22e-9■□□□□ 10.4
NCBP2P52298 GTF2IRD2B-205ENST00000613786 484 ntTSL 216.3■□□□□ 0.22e-9■□□□□ 10.4
NCBP2P52298 SEH1L-203ENST00000585730 582 ntTSL 216.25■□□□□ 0.193e-7■□□□□ 10.4
NCBP2P52298 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.183e-7■□□□□ 10.4
NCBP2P52298 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.183e-7■□□□□ 10.4
NCBP2P52298 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.86■□□□□ 0.138e-10■□□□□ 10.4
NCBP2P52298 SEH1L-206ENST00000589446 655 ntTSL 515.6■□□□□ 0.093e-7■□□□□ 10.4
NCBP2P52298 POGLUT1-208ENST00000497447 1361 ntTSL 215.41■□□□□ 0.063e-7■□□□□ 10.4
NCBP2P52298 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.023e-7■□□□□ 10.4
NCBP2P52298 CDK8-205ENST00000536792 3032 ntTSL 1 (best)14.98□□□□□ -0.013e-7■□□□□ 10.4
NCBP2P52298 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.033e-7■□□□□ 10.4
NCBP2P52298 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.058e-10■□□□□ 10.4
NCBP2P52298 DDX55-212ENST00000544738 956 ntTSL 514.72□□□□□ -0.053e-7■□□□□ 10.4
NCBP2P52298 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.083e-7■□□□□ 10.4
NCBP2P52298 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.123e-7■□□□□ 10.4
NCBP2P52298 CDC25C-206ENST00000510119 867 ntTSL 314.1□□□□□ -0.153e-7■□□□□ 10.4
NCBP2P52298 DDX55-202ENST00000354291 1004 ntTSL 514.01□□□□□ -0.173e-7■□□□□ 10.4
NCBP2P52298 DDX55-209ENST00000542286 2767 ntTSL 213.95□□□□□ -0.183e-7■□□□□ 10.4
NCBP2P52298 GTF2IRD2B-202ENST00000418185 3485 ntTSL 1 (best)13.64□□□□□ -0.232e-9■□□□□ 10.4
NCBP2P52298 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.232e-9■□□□□ 10.4
NCBP2P52298 CCDC88A-211ENST00000471947 3713 ntTSL 1 (best)13.15□□□□□ -0.32e-9■□□□□ 10.4
NCBP2P52298 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.312e-9■□□□□ 10.4
NCBP2P52298 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC13.04□□□□□ -0.322e-9■□□□□ 10.4
NCBP2P52298 POGLUT1-202ENST00000390401 731 ntTSL 312.63□□□□□ -0.393e-7■□□□□ 10.4
NCBP2P52298 NUMA1-205ENST00000393695 7343 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.423e-7■□□□□ 10.4
NCBP2P52298 SEH1L-204ENST00000587761 863 ntTSL 512.42□□□□□ -0.423e-7■□□□□ 10.4
NCBP2P52298 CCDC88A-214ENST00000621814 3089 ntTSL 5 BASIC12.26□□□□□ -0.452e-9■□□□□ 10.4
NCBP2P52298 CDC25C-202ENST00000348983 1951 ntTSL 5 BASIC12.23□□□□□ -0.453e-7■□□□□ 10.4
NCBP2P52298 DDX55-213ENST00000545042 450 ntTSL 512.22□□□□□ -0.453e-7■□□□□ 10.4
NCBP2P52298 NUMA1-203ENST00000366394 539 ntAPPRIS ALT2 TSL 512.11□□□□□ -0.473e-7■□□□□ 10.4
NCBP2P52298 CALCOCO1-207ENST00000547949 532 ntTSL 512.03□□□□□ -0.483e-7■□□□□ 10.4
NCBP2P52298 ANAPC4-208ENST00000507809 435 ntTSL 312□□□□□ -0.492e-9■□□□□ 10.4
NCBP2P52298 NUMA1-226ENST00000543937 911 ntAPPRIS ALT2 TSL 511.98□□□□□ -0.493e-7■□□□□ 10.4
NCBP2P52298 NUMA1-231ENST00000546131 280 ntAPPRIS ALT2 TSL 511.98□□□□□ -0.493e-7■□□□□ 10.4
NCBP2P52298 CCDC88A-207ENST00000436346 9811 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.52e-9■□□□□ 10.4
NCBP2P52298 NT5DC2-212ENST00000487779 536 ntTSL 311.83□□□□□ -0.525e-9■□□□□ 10.4
NCBP2P52298 AK4-201ENST00000327299 6836 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.543e-7■□□□□ 10.4
NCBP2P52298 SEH1L-201ENST00000262124 3494 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.553e-7■□□□□ 10.4
NCBP2P52298 NUMA1-209ENST00000535111 582 ntAPPRIS ALT2 TSL 311.51□□□□□ -0.573e-7■□□□□ 10.4
NCBP2P52298 NUMA1-218ENST00000540843 1969 ntTSL 211.5□□□□□ -0.573e-7■□□□□ 10.4
NCBP2P52298 NT5DC2-201ENST00000307076 2047 ntAPPRIS P3 TSL 2 BASIC11.47□□□□□ -0.575e-9■□□□□ 10.4
NCBP2P52298 NUMA1-202ENST00000358965 7227 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.643e-7■□□□□ 10.4
NCBP2P52298 POGLUT1-201ENST00000295588 3533 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.653e-7■□□□□ 10.4
NCBP2P52298 NUMA1-221ENST00000541641 589 ntAPPRIS ALT2 TSL 510.59□□□□□ -0.713e-7■□□□□ 10.4
NCBP2P52298 ANAPC4-210ENST00000510092 2599 ntAPPRIS ALT1 TSL 5 BASIC10.57□□□□□ -0.722e-9■□□□□ 10.4
NCBP2P52298 CCDC88A-202ENST00000336838 9505 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.812e-9■□□□□ 10.4
NCBP2P52298 SEH1L-209ENST00000592170 787 ntTSL 59.87□□□□□ -0.833e-7■□□□□ 10.4
NCBP2P52298 AIMP1-201ENST00000358008 2412 ntAPPRIS P3 TSL 2 BASIC9.67□□□□□ -0.863e-7■□□□□ 10.4
NCBP2P52298 NUMA1-204ENST00000368959 583 ntAPPRIS ALT2 TSL 39.6□□□□□ -0.873e-7■□□□□ 10.4
NCBP2P52298 NUMA1-214ENST00000537905 598 ntTSL 38.9□□□□□ -0.983e-7■□□□□ 10.4
NCBP2P52298 KIAA1586-202ENST00000488682 701 ntTSL 38.89□□□□□ -0.998e-10■□□□□ 10.4
NCBP2P52298 NUMA1-232ENST00000613205 3940 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.123e-7■□□□□ 10.4
NCBP2P52298 CDC25C-201ENST00000323760 2128 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.163e-7■□□□□ 10.4
NCBP2P52298 PPA2-214ENST00000506815 839 ntTSL 27.75□□□□□ -1.172e-9■□□□□ 10.4
NCBP2P52298 POGLUT1-205ENST00000476573 567 ntTSL 47.6□□□□□ -1.193e-7■□□□□ 10.4
NCBP2P52298 CDC25C-203ENST00000415130 1556 ntTSL 5 BASIC7.58□□□□□ -1.23e-7■□□□□ 10.4
NCBP2P52298 ANAPC4-204ENST00000505080 569 ntTSL 47.05□□□□□ -1.282e-9■□□□□ 10.4
NCBP2P52298 CALCOCO1-215ENST00000549688 549 ntTSL 46.72□□□□□ -1.333e-7■□□□□ 10.4
NCBP2P52298 CDC25C-204ENST00000503022 1059 ntTSL 36.5□□□□□ -1.373e-7■□□□□ 10.4
NCBP2P52298 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC6.13□□□□□ -1.433e-7■□□□□ 10.4
NCBP2P52298 NUMA1-225ENST00000543450 3339 ntTSL 1 (best)5.86□□□□□ -1.473e-7■□□□□ 10.4
NCBP2P52298 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.613e-7■□□□□ 10.4
NCBP2P52298 CALCOCO1-221ENST00000552623 551 ntTSL 43.71□□□□□ -1.823e-7■□□□□ 10.4
NCBP2P52298 AIMP1-204ENST00000510207 568 ntTSL 42.69□□□□□ -1.983e-7■□□□□ 10.4
NCBP2P52298 FAHD2A-203ENST00000445649 522 ntTSL 216.26■□□□□ 0.192e-9■□□□□ 10.4
NCBP2P52298 FAHD2A-202ENST00000418606 715 ntTSL 316.21■□□□□ 0.192e-9■□□□□ 10.4
NCBP2P52298 FAHD2A-201ENST00000233379 4757 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.422e-9■□□□□ 10.4
NCBP2P52298 FAHD2A-204ENST00000447036 1366 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.532e-9■□□□□ 10.4
NCBP2P52298 UGP2-212ENST00000480679 505 ntTSL 518.87■□□□□ 0.619e-11■□□□□ 10.4
NCBP2P52298 UGP2-223ENST00000493222 864 ntTSL 318.87■□□□□ 0.619e-11■□□□□ 10.4
NCBP2P52298 UGP2-227ENST00000497510 722 ntTSL 418.51■□□□□ 0.559e-11■□□□□ 10.4
NCBP2P52298 UGP2-213ENST00000482668 645 ntTSL 317.15■□□□□ 0.349e-11■□□□□ 10.4
NCBP2P52298 UGP2-219ENST00000487469 1015 ntTSL 516.72■□□□□ 0.279e-11■□□□□ 10.4
NCBP2P52298 UGP2-215ENST00000483461 495 ntTSL 416.68■□□□□ 0.269e-11■□□□□ 10.4
NCBP2P52298 UGP2-205ENST00000466642 1023 ntTSL 416.6■□□□□ 0.259e-11■□□□□ 10.4
NCBP2P52298 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.24■□□□□ 0.199e-11■□□□□ 10.4
Retrieved 100 of 18,329 protein–RNA pairs in 352.6 ms