Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CPT1AP50416 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC19.38■□□□□ 0.69
CPT1AP50416 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC19.38■□□□□ 0.69
CPT1AP50416 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.38■□□□□ 0.69
CPT1AP50416 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
CPT1AP50416 BX323043.1-201ENST00000641006 1765 ntBASIC19.38■□□□□ 0.69
CPT1AP50416 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CPT1AP50416 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CPT1AP50416 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CPT1AP50416 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CPT1AP50416 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CPT1AP50416 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
CPT1AP50416 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CPT1AP50416 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC19.37■□□□□ 0.69
CPT1AP50416 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CPT1AP50416 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
CPT1AP50416 REM2-202ENST00000536884 1331 ntTSL 2 BASIC19.37■□□□□ 0.69
CPT1AP50416 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CPT1AP50416 DDT-204ENST00000404092 805 ntTSL 3 BASIC19.37■□□□□ 0.69
CPT1AP50416 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CPT1AP50416 NABP1-203ENST00000409510 843 ntTSL 5 BASIC19.37■□□□□ 0.69
CPT1AP50416 AL645939.2-201ENST00000427340 991 ntBASIC19.37■□□□□ 0.69
CPT1AP50416 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CPT1AP50416 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
CPT1AP50416 AP000344.2-201ENST00000512987 629 ntBASIC19.37■□□□□ 0.69
CPT1AP50416 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC19.37■□□□□ 0.69
CPT1AP50416 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.37■□□□□ 0.69
CPT1AP50416 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC19.37■□□□□ 0.69
CPT1AP50416 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CPT1AP50416 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC19.37■□□□□ 0.69
CPT1AP50416 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CPT1AP50416 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC19.37■□□□□ 0.69
CPT1AP50416 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC19.37■□□□□ 0.69
CPT1AP50416 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.37■□□□□ 0.69
CPT1AP50416 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CPT1AP50416 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CPT1AP50416 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CPT1AP50416 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CPT1AP50416 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CPT1AP50416 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPT1AP50416 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPT1AP50416 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CPT1AP50416 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPT1AP50416 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC19.36■□□□□ 0.69
CPT1AP50416 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CPT1AP50416 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.36■□□□□ 0.69
CPT1AP50416 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.36■□□□□ 0.69
CPT1AP50416 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CPT1AP50416 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC19.36■□□□□ 0.69
CPT1AP50416 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPT1AP50416 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPT1AP50416 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPT1AP50416 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CPT1AP50416 PNMT-202ENST00000394246 821 ntTSL 2 BASIC19.36■□□□□ 0.69
CPT1AP50416 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC19.36■□□□□ 0.69
CPT1AP50416 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC19.36■□□□□ 0.69
CPT1AP50416 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC19.36■□□□□ 0.69
CPT1AP50416 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
CPT1AP50416 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPT1AP50416 CITED2-204ENST00000618718 901 ntTSL 2 BASIC19.36■□□□□ 0.69
CPT1AP50416 AC091812.2-201ENST00000619081 385 ntBASIC19.36■□□□□ 0.69
CPT1AP50416 BCL2-203ENST00000589955 5011 ntBASIC19.36■□□□□ 0.69
CPT1AP50416 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPT1AP50416 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPT1AP50416 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.36■□□□□ 0.69
CPT1AP50416 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPT1AP50416 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPT1AP50416 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPT1AP50416 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPT1AP50416 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPT1AP50416 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CPT1AP50416 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPT1AP50416 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.35■□□□□ 0.69
CPT1AP50416 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC19.35■□□□□ 0.69
CPT1AP50416 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CPT1AP50416 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPT1AP50416 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPT1AP50416 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPT1AP50416 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC19.35■□□□□ 0.69
CPT1AP50416 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
CPT1AP50416 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CPT1AP50416 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC19.35■□□□□ 0.69
CPT1AP50416 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPT1AP50416 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
CPT1AP50416 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPT1AP50416 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC19.35■□□□□ 0.69
CPT1AP50416 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPT1AP50416 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC19.35■□□□□ 0.69
CPT1AP50416 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
CPT1AP50416 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CPT1AP50416 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC19.35■□□□□ 0.69
CPT1AP50416 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPT1AP50416 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CPT1AP50416 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC19.35■□□□□ 0.69
CPT1AP50416 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPT1AP50416 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPT1AP50416 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPT1AP50416 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPT1AP50416 AC093503.3-201ENST00000624917 2352 ntBASIC19.35■□□□□ 0.69
CPT1AP50416 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms