Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC15.66■□□□□ 0.1
SRP9P49458 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
SRP9P49458 AL163051.1-201ENST00000569214 1512 ntBASIC15.66■□□□□ 0.1
SRP9P49458 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SRP9P49458 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
SRP9P49458 CROCCP2-202ENST00000412962 2773 ntBASIC15.66■□□□□ 0.1
SRP9P49458 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC15.66■□□□□ 0.1
SRP9P49458 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SRP9P49458 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SRP9P49458 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
SRP9P49458 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SRP9P49458 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.66■□□□□ 0.1
SRP9P49458 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SRP9P49458 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SRP9P49458 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
SRP9P49458 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.66■□□□□ 0.1
SRP9P49458 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SRP9P49458 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SRP9P49458 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SRP9P49458 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SRP9P49458 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.65■□□□□ 0.1
SRP9P49458 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
SRP9P49458 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SRP9P49458 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
SRP9P49458 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC15.65■□□□□ 0.1
SRP9P49458 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SRP9P49458 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
SRP9P49458 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SRP9P49458 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC15.65■□□□□ 0.1
SRP9P49458 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SRP9P49458 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SRP9P49458 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SRP9P49458 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SRP9P49458 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SRP9P49458 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SRP9P49458 MIR149-201ENST00000384879 89 ntBASIC15.65■□□□□ 0.1
SRP9P49458 STARP1-201ENST00000397973 869 ntBASIC15.65■□□□□ 0.1
SRP9P49458 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC15.65■□□□□ 0.1
SRP9P49458 AC063952.2-201ENST00000498792 1227 ntBASIC15.65■□□□□ 0.1
SRP9P49458 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC15.65■□□□□ 0.1
SRP9P49458 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC15.65■□□□□ 0.1
SRP9P49458 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
SRP9P49458 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
SRP9P49458 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SRP9P49458 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SRP9P49458 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC15.65■□□□□ 0.1
SRP9P49458 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SRP9P49458 GMCL1P1-201ENST00000463439 1581 ntBASIC15.65■□□□□ 0.1
SRP9P49458 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SRP9P49458 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SRP9P49458 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SRP9P49458 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
SRP9P49458 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SRP9P49458 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SRP9P49458 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SRP9P49458 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
SRP9P49458 AC105020.1-201ENST00000435356 2205 ntBASIC15.64■□□□□ 0.09
SRP9P49458 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
SRP9P49458 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.64■□□□□ 0.09
SRP9P49458 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
SRP9P49458 AC106886.4-201ENST00000623557 2502 ntBASIC15.64■□□□□ 0.09
SRP9P49458 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SRP9P49458 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SRP9P49458 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SRP9P49458 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SRP9P49458 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.64■□□□□ 0.09
SRP9P49458 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SRP9P49458 PCDHA14-201ENST00000506751 2298 ntBASIC15.64■□□□□ 0.09
SRP9P49458 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SRP9P49458 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SRP9P49458 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC15.64■□□□□ 0.09
SRP9P49458 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC15.64■□□□□ 0.09
SRP9P49458 RASA4DP-201ENST00000460726 1199 ntBASIC15.64■□□□□ 0.09
SRP9P49458 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SRP9P49458 AC022616.7-201ENST00000525383 220 ntBASIC15.64■□□□□ 0.09
SRP9P49458 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC15.64■□□□□ 0.09
SRP9P49458 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
SRP9P49458 LTBR-211ENST00000543190 785 ntTSL 3 BASIC15.64■□□□□ 0.09
SRP9P49458 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SRP9P49458 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC15.64■□□□□ 0.09
SRP9P49458 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.64■□□□□ 0.09
SRP9P49458 AC099343.3-201ENST00000605834 2503 ntBASIC15.64■□□□□ 0.09
SRP9P49458 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SRP9P49458 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SRP9P49458 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.64■□□□□ 0.09
SRP9P49458 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SRP9P49458 AC009102.3-201ENST00000623118 1491 ntBASIC15.64■□□□□ 0.09
SRP9P49458 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SRP9P49458 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SRP9P49458 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC15.64■□□□□ 0.09
SRP9P49458 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
SRP9P49458 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SRP9P49458 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
SRP9P49458 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SRP9P49458 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SRP9P49458 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SRP9P49458 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SRP9P49458 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.63■□□□□ 0.09
SRP9P49458 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SRP9P49458 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms