Protein–RNA interactions for Protein: P42695

NCAPD3, Condensin-2 complex subunit D3, humanhuman

Predictions only

Length 1,498 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3P42695 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC30.67■■■□□ 2.5
NCAPD3P42695 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
NCAPD3P42695 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
NCAPD3P42695 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
NCAPD3P42695 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC30.67■■■□□ 2.5
NCAPD3P42695 KRT17P7-201ENST00000451704 1104 ntBASIC30.67■■■□□ 2.5
NCAPD3P42695 AC009477.1-201ENST00000452936 217 ntBASIC30.67■■■□□ 2.5
NCAPD3P42695 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC30.67■■■□□ 2.5
NCAPD3P42695 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC30.67■■■□□ 2.5
NCAPD3P42695 SPDYE12P-201ENST00000618416 771 ntBASIC30.67■■■□□ 2.5
NCAPD3P42695 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
NCAPD3P42695 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
NCAPD3P42695 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
NCAPD3P42695 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
NCAPD3P42695 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC30.67■■■□□ 2.5
NCAPD3P42695 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC30.66■■■□□ 2.5
NCAPD3P42695 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
NCAPD3P42695 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC30.66■■■□□ 2.5
NCAPD3P42695 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
NCAPD3P42695 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
NCAPD3P42695 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC30.66■■■□□ 2.5
NCAPD3P42695 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC30.66■■■□□ 2.5
NCAPD3P42695 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
NCAPD3P42695 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC30.66■■■□□ 2.5
NCAPD3P42695 AC008267.7-201ENST00000624570 1194 ntBASIC30.66■■■□□ 2.5
NCAPD3P42695 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC30.66■■■□□ 2.5
NCAPD3P42695 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC30.66■■■□□ 2.5
NCAPD3P42695 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
NCAPD3P42695 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC30.65■■■□□ 2.5
NCAPD3P42695 AC093677.2-201ENST00000600169 1863 ntBASIC30.65■■■□□ 2.5
NCAPD3P42695 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
NCAPD3P42695 LY6E-204ENST00000519546 971 ntTSL 2 BASIC30.65■■■□□ 2.5
NCAPD3P42695 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC30.65■■■□□ 2.5
NCAPD3P42695 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC30.65■■■□□ 2.5
NCAPD3P42695 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC30.65■■■□□ 2.5
NCAPD3P42695 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC30.65■■■□□ 2.5
NCAPD3P42695 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC30.65■■■□□ 2.5
NCAPD3P42695 AL031598.1-201ENST00000561511 1773 ntBASIC30.65■■■□□ 2.5
NCAPD3P42695 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC30.65■■■□□ 2.5
NCAPD3P42695 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC30.65■■■□□ 2.5
NCAPD3P42695 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC30.65■■■□□ 2.5
NCAPD3P42695 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC30.65■■■□□ 2.5
NCAPD3P42695 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC30.64■■■□□ 2.5
NCAPD3P42695 HILS1-202ENST00000545329 423 ntBASIC30.64■■■□□ 2.5
NCAPD3P42695 TP53TG3HP-202ENST00000569755 579 ntBASIC30.64■■■□□ 2.5
NCAPD3P42695 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
NCAPD3P42695 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
NCAPD3P42695 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
NCAPD3P42695 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC30.64■■■□□ 2.5
NCAPD3P42695 AC073592.3-201ENST00000625118 1834 ntBASIC30.64■■■□□ 2.5
NCAPD3P42695 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
NCAPD3P42695 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC30.64■■■□□ 2.5
NCAPD3P42695 AL096828.2-201ENST00000567259 1965 ntBASIC30.64■■■□□ 2.5
NCAPD3P42695 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.49
NCAPD3P42695 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC30.64■■■□□ 2.49
NCAPD3P42695 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.49
NCAPD3P42695 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.49
NCAPD3P42695 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC30.64■■■□□ 2.49
NCAPD3P42695 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
NCAPD3P42695 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC30.63■■■□□ 2.49
NCAPD3P42695 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC30.63■■■□□ 2.49
NCAPD3P42695 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC30.63■■■□□ 2.49
NCAPD3P42695 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC30.63■■■□□ 2.49
NCAPD3P42695 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC30.63■■■□□ 2.49
NCAPD3P42695 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC30.63■■■□□ 2.49
NCAPD3P42695 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
NCAPD3P42695 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC30.63■■■□□ 2.49
NCAPD3P42695 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC30.63■■■□□ 2.49
NCAPD3P42695 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
NCAPD3P42695 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC30.63■■■□□ 2.49
NCAPD3P42695 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC30.63■■■□□ 2.49
NCAPD3P42695 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC30.63■■■□□ 2.49
NCAPD3P42695 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
NCAPD3P42695 WASH6P-202ENST00000359512 1437 ntBASIC30.63■■■□□ 2.49
NCAPD3P42695 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC30.63■■■□□ 2.49
NCAPD3P42695 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
NCAPD3P42695 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC30.63■■■□□ 2.49
NCAPD3P42695 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC30.63■■■□□ 2.49
NCAPD3P42695 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC30.63■■■□□ 2.49
NCAPD3P42695 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC30.63■■■□□ 2.49
NCAPD3P42695 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC30.63■■■□□ 2.49
NCAPD3P42695 MIR6799-201ENST00000620297 69 ntBASIC30.63■■■□□ 2.49
NCAPD3P42695 IGHV3-72-202ENST00000621503 303 ntBASIC30.63■■■□□ 2.49
NCAPD3P42695 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC30.62■■■□□ 2.49
NCAPD3P42695 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
NCAPD3P42695 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC30.62■■■□□ 2.49
NCAPD3P42695 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC30.62■■■□□ 2.49
NCAPD3P42695 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC30.62■■■□□ 2.49
NCAPD3P42695 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
NCAPD3P42695 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC30.62■■■□□ 2.49
NCAPD3P42695 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
NCAPD3P42695 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC30.62■■■□□ 2.49
NCAPD3P42695 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
NCAPD3P42695 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
NCAPD3P42695 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
NCAPD3P42695 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC30.62■■■□□ 2.49
NCAPD3P42695 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
NCAPD3P42695 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
NCAPD3P42695 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
NCAPD3P42695 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms