Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.42
CCNFP41002 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCNFP41002 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCNFP41002 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCNFP41002 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCNFP41002 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCNFP41002 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCNFP41002 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCNFP41002 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCNFP41002 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCNFP41002 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.7■□□□□ 0.42
CCNFP41002 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.7■□□□□ 0.42
CCNFP41002 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.7■□□□□ 0.42
CCNFP41002 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.7■□□□□ 0.42
CCNFP41002 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.7■□□□□ 0.42
CCNFP41002 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.7■□□□□ 0.42
CCNFP41002 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.7■□□□□ 0.42
CCNFP41002 AL121956.5-201ENST00000625261 221 ntBASIC17.7■□□□□ 0.42
CCNFP41002 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.7■□□□□ 0.42
CCNFP41002 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCNFP41002 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCNFP41002 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CCNFP41002 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCNFP41002 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
CCNFP41002 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CCNFP41002 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.7■□□□□ 0.42
CCNFP41002 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCNFP41002 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
CCNFP41002 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CCNFP41002 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCNFP41002 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCNFP41002 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCNFP41002 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCNFP41002 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCNFP41002 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCNFP41002 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.69■□□□□ 0.42
CCNFP41002 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCNFP41002 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.69■□□□□ 0.42
CCNFP41002 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCNFP41002 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCNFP41002 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
CCNFP41002 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCNFP41002 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCNFP41002 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCNFP41002 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.69■□□□□ 0.42
CCNFP41002 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCNFP41002 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.69■□□□□ 0.42
CCNFP41002 AP003733.1-201ENST00000491725 852 ntBASIC17.69■□□□□ 0.42
CCNFP41002 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.69■□□□□ 0.42
CCNFP41002 AL136038.3-201ENST00000561909 1096 ntBASIC17.69■□□□□ 0.42
CCNFP41002 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.69■□□□□ 0.42
CCNFP41002 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.69■□□□□ 0.42
CCNFP41002 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.69■□□□□ 0.42
CCNFP41002 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.69■□□□□ 0.42
CCNFP41002 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCNFP41002 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCNFP41002 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCNFP41002 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCNFP41002 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCNFP41002 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCNFP41002 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCNFP41002 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CCNFP41002 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCNFP41002 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CCNFP41002 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCNFP41002 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.69■□□□□ 0.42
CCNFP41002 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCNFP41002 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCNFP41002 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCNFP41002 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCNFP41002 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.68■□□□□ 0.42
CCNFP41002 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCNFP41002 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCNFP41002 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCNFP41002 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.68■□□□□ 0.42
CCNFP41002 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CCNFP41002 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCNFP41002 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCNFP41002 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.68■□□□□ 0.42
CCNFP41002 AL031133.1-201ENST00000406807 723 ntBASIC17.68■□□□□ 0.42
CCNFP41002 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCNFP41002 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.68■□□□□ 0.42
CCNFP41002 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCNFP41002 KRT18P65-201ENST00000439811 1286 ntBASIC17.68■□□□□ 0.42
CCNFP41002 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.68■□□□□ 0.42
CCNFP41002 VENTXP5-201ENST00000523979 775 ntBASIC17.68■□□□□ 0.42
CCNFP41002 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
CCNFP41002 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.68■□□□□ 0.42
CCNFP41002 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.68■□□□□ 0.42
CCNFP41002 AC016396.2-201ENST00000562575 1417 ntBASIC17.68■□□□□ 0.42
CCNFP41002 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CCNFP41002 AC087388.1-201ENST00000571370 1112 ntBASIC17.68■□□□□ 0.42
CCNFP41002 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
CCNFP41002 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.68■□□□□ 0.42
CCNFP41002 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CCNFP41002 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.68■□□□□ 0.42
CCNFP41002 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.68■□□□□ 0.42
CCNFP41002 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCNFP41002 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCNFP41002 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms