Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 DUTP2-201ENST00000519164 463 ntBASIC16.11■□□□□ 0.17
RFC3P40938 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.11■□□□□ 0.17
RFC3P40938 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.11■□□□□ 0.17
RFC3P40938 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.11■□□□□ 0.17
RFC3P40938 AC139887.3-201ENST00000568585 713 ntBASIC16.11■□□□□ 0.17
RFC3P40938 AL671883.3-201ENST00000603274 991 ntBASIC16.11■□□□□ 0.17
RFC3P40938 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.11■□□□□ 0.17
RFC3P40938 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.11■□□□□ 0.17
RFC3P40938 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RFC3P40938 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RFC3P40938 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RFC3P40938 AC099398.1-201ENST00000567919 2776 ntBASIC16.11■□□□□ 0.17
RFC3P40938 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RFC3P40938 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.11■□□□□ 0.17
RFC3P40938 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RFC3P40938 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RFC3P40938 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.11■□□□□ 0.17
RFC3P40938 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RFC3P40938 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
RFC3P40938 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.11■□□□□ 0.17
RFC3P40938 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RFC3P40938 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RFC3P40938 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RFC3P40938 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RFC3P40938 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
RFC3P40938 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RFC3P40938 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.1■□□□□ 0.17
RFC3P40938 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RFC3P40938 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RFC3P40938 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RFC3P40938 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RFC3P40938 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.1■□□□□ 0.17
RFC3P40938 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.1■□□□□ 0.17
RFC3P40938 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.1■□□□□ 0.17
RFC3P40938 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
RFC3P40938 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.1■□□□□ 0.17
RFC3P40938 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.1■□□□□ 0.17
RFC3P40938 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.1■□□□□ 0.17
RFC3P40938 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RFC3P40938 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.1■□□□□ 0.17
RFC3P40938 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.1■□□□□ 0.17
RFC3P40938 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.1■□□□□ 0.17
RFC3P40938 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RFC3P40938 MTDHP4-201ENST00000600287 670 ntBASIC16.1■□□□□ 0.17
RFC3P40938 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RFC3P40938 AC025062.2-201ENST00000605477 670 ntBASIC16.1■□□□□ 0.17
RFC3P40938 AC116407.3-201ENST00000623905 1129 ntBASIC16.1■□□□□ 0.17
RFC3P40938 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
RFC3P40938 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RFC3P40938 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
RFC3P40938 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.1■□□□□ 0.17
RFC3P40938 AC097374.2-201ENST00000618617 1306 ntBASIC16.1■□□□□ 0.17
RFC3P40938 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RFC3P40938 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RFC3P40938 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
RFC3P40938 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.1■□□□□ 0.17
RFC3P40938 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.1■□□□□ 0.17
RFC3P40938 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.1■□□□□ 0.17
RFC3P40938 AC011270.2-201ENST00000624293 2550 ntBASIC16.1■□□□□ 0.17
RFC3P40938 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RFC3P40938 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RFC3P40938 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.1■□□□□ 0.17
RFC3P40938 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
RFC3P40938 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.1■□□□□ 0.17
RFC3P40938 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RFC3P40938 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
RFC3P40938 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
RFC3P40938 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RFC3P40938 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.09■□□□□ 0.17
RFC3P40938 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
RFC3P40938 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
RFC3P40938 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RFC3P40938 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RFC3P40938 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
RFC3P40938 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.09■□□□□ 0.17
RFC3P40938 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RFC3P40938 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
RFC3P40938 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RFC3P40938 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RFC3P40938 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RFC3P40938 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.09■□□□□ 0.17
RFC3P40938 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RFC3P40938 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.09■□□□□ 0.17
RFC3P40938 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RFC3P40938 AC092910.1-201ENST00000482027 1129 ntBASIC16.09■□□□□ 0.17
RFC3P40938 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RFC3P40938 OR7E14P-202ENST00000530490 1290 ntBASIC16.09■□□□□ 0.17
RFC3P40938 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.09■□□□□ 0.17
RFC3P40938 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RFC3P40938 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.09■□□□□ 0.17
RFC3P40938 AC012640.2-201ENST00000561606 901 ntBASIC16.09■□□□□ 0.17
RFC3P40938 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.09■□□□□ 0.17
RFC3P40938 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RFC3P40938 AP000867.4-201ENST00000641616 219 ntBASIC16.09■□□□□ 0.17
RFC3P40938 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
RFC3P40938 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
RFC3P40938 AC009949.1-201ENST00000623048 1830 ntBASIC16.09■□□□□ 0.17
RFC3P40938 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
RFC3P40938 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RFC3P40938 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms