Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 AL138688.1-201ENST00000624851 1594 ntBASIC14.52□□□□□ -0.08
SNCAP37840 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.52□□□□□ -0.08
SNCAP37840 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
SNCAP37840 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
SNCAP37840 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.52□□□□□ -0.08
SNCAP37840 HOXB1-202ENST00000577092 1414 ntBASIC14.52□□□□□ -0.08
SNCAP37840 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
SNCAP37840 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
SNCAP37840 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SNCAP37840 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SNCAP37840 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
SNCAP37840 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SNCAP37840 PEX7-202ENST00000367756 680 ntTSL 3 BASIC14.52□□□□□ -0.09
SNCAP37840 AC012618.2-201ENST00000428058 849 ntBASIC14.52□□□□□ -0.09
SNCAP37840 AL158047.1-201ENST00000445918 881 ntBASIC14.52□□□□□ -0.09
SNCAP37840 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC14.52□□□□□ -0.09
SNCAP37840 GRAP-204ENST00000573099 846 ntTSL 3 BASIC14.52□□□□□ -0.09
SNCAP37840 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC14.52□□□□□ -0.09
SNCAP37840 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC14.52□□□□□ -0.09
SNCAP37840 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC14.52□□□□□ -0.09
SNCAP37840 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SNCAP37840 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
SNCAP37840 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SNCAP37840 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
SNCAP37840 SDHAP2-201ENST00000455183 2001 ntBASIC14.52□□□□□ -0.09
SNCAP37840 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SNCAP37840 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
SNCAP37840 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SNCAP37840 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.09
SNCAP37840 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
SNCAP37840 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
SNCAP37840 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC14.52□□□□□ -0.09
SNCAP37840 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC14.52□□□□□ -0.09
SNCAP37840 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
SNCAP37840 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SNCAP37840 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
SNCAP37840 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
SNCAP37840 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.51□□□□□ -0.09
SNCAP37840 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
SNCAP37840 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC14.51□□□□□ -0.09
SNCAP37840 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SNCAP37840 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SNCAP37840 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
SNCAP37840 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SNCAP37840 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.51□□□□□ -0.09
SNCAP37840 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
SNCAP37840 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SNCAP37840 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
SNCAP37840 TSPY17P-201ENST00000450329 467 ntBASIC14.51□□□□□ -0.09
SNCAP37840 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SNCAP37840 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC14.51□□□□□ -0.09
SNCAP37840 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.51□□□□□ -0.09
SNCAP37840 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SNCAP37840 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
SNCAP37840 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SNCAP37840 OS9-205ENST00000413095 1660 ntTSL 2 BASIC14.51□□□□□ -0.09
SNCAP37840 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SNCAP37840 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC14.51□□□□□ -0.09
SNCAP37840 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SNCAP37840 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.51□□□□□ -0.09
SNCAP37840 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
SNCAP37840 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
SNCAP37840 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.51□□□□□ -0.09
SNCAP37840 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SNCAP37840 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.5□□□□□ -0.09
SNCAP37840 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SNCAP37840 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC14.5□□□□□ -0.09
SNCAP37840 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC14.5□□□□□ -0.09
SNCAP37840 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC14.5□□□□□ -0.09
SNCAP37840 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.5□□□□□ -0.09
SNCAP37840 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SNCAP37840 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
SNCAP37840 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
SNCAP37840 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SNCAP37840 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SNCAP37840 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC14.5□□□□□ -0.09
SNCAP37840 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SNCAP37840 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SNCAP37840 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.5□□□□□ -0.09
SNCAP37840 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.5□□□□□ -0.09
SNCAP37840 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SNCAP37840 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SNCAP37840 SLC25A1P2-201ENST00000430693 912 ntBASIC14.5□□□□□ -0.09
SNCAP37840 CCR12P-201ENST00000446203 998 ntBASIC14.5□□□□□ -0.09
SNCAP37840 TSPY20P-201ENST00000450910 630 ntBASIC14.5□□□□□ -0.09
SNCAP37840 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SNCAP37840 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC14.5□□□□□ -0.09
SNCAP37840 REXO1L10P-201ENST00000615707 1290 ntBASIC14.5□□□□□ -0.09
SNCAP37840 REXO1L12P-201ENST00000622156 912 ntBASIC14.5□□□□□ -0.09
SNCAP37840 AL049637.2-201ENST00000641778 930 ntBASIC14.5□□□□□ -0.09
SNCAP37840 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
SNCAP37840 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.5□□□□□ -0.09
SNCAP37840 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.5□□□□□ -0.09
SNCAP37840 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SNCAP37840 ASL-204ENST00000395331 1538 ntTSL 5 BASIC14.5□□□□□ -0.09
SNCAP37840 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
SNCAP37840 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SNCAP37840 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
SNCAP37840 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SNCAP37840 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms