Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CKS2P33552 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC12.97□□□□□ -0.33
CKS2P33552 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC12.97□□□□□ -0.33
CKS2P33552 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
CKS2P33552 AC116407.2-201ENST00000613639 860 ntBASIC12.97□□□□□ -0.33
CKS2P33552 AC008622.2-201ENST00000617006 1229 ntBASIC12.97□□□□□ -0.33
CKS2P33552 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC12.97□□□□□ -0.33
CKS2P33552 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC12.97□□□□□ -0.33
CKS2P33552 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
CKS2P33552 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC12.97□□□□□ -0.33
CKS2P33552 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CKS2P33552 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC12.97□□□□□ -0.33
CKS2P33552 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CKS2P33552 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CKS2P33552 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CKS2P33552 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CKS2P33552 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CKS2P33552 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CKS2P33552 HYMAI-201ENST00000635591 3347 ntBASIC12.97□□□□□ -0.33
CKS2P33552 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CKS2P33552 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CKS2P33552 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
CKS2P33552 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CKS2P33552 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CKS2P33552 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CKS2P33552 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
CKS2P33552 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC12.97□□□□□ -0.33
CKS2P33552 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC12.97□□□□□ -0.33
CKS2P33552 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
CKS2P33552 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC12.97□□□□□ -0.33
CKS2P33552 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
CKS2P33552 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CKS2P33552 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
CKS2P33552 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC12.96□□□□□ -0.33
CKS2P33552 AC060834.1-201ENST00000443027 2032 ntBASIC12.96□□□□□ -0.33
CKS2P33552 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CKS2P33552 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CKS2P33552 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CKS2P33552 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC12.96□□□□□ -0.33
CKS2P33552 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CKS2P33552 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC12.96□□□□□ -0.33
CKS2P33552 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC12.96□□□□□ -0.33
CKS2P33552 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CKS2P33552 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CKS2P33552 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CKS2P33552 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CKS2P33552 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
CKS2P33552 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
CKS2P33552 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
CKS2P33552 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
CKS2P33552 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CKS2P33552 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
CKS2P33552 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC12.96□□□□□ -0.33
CKS2P33552 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
CKS2P33552 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CKS2P33552 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CKS2P33552 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC12.96□□□□□ -0.33
CKS2P33552 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CKS2P33552 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CKS2P33552 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CKS2P33552 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CKS2P33552 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CKS2P33552 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CKS2P33552 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC12.96□□□□□ -0.33
CKS2P33552 KRT16P5-201ENST00000455284 522 ntBASIC12.96□□□□□ -0.33
CKS2P33552 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC12.96□□□□□ -0.33
CKS2P33552 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC12.96□□□□□ -0.33
CKS2P33552 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC12.96□□□□□ -0.33
CKS2P33552 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC12.96□□□□□ -0.33
CKS2P33552 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC12.96□□□□□ -0.33
CKS2P33552 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
CKS2P33552 AC011298.2-201ENST00000617989 482 ntBASIC12.96□□□□□ -0.33
CKS2P33552 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC12.96□□□□□ -0.33
CKS2P33552 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CKS2P33552 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CKS2P33552 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC12.96□□□□□ -0.33
CKS2P33552 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
CKS2P33552 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
CKS2P33552 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CKS2P33552 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CKS2P33552 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CKS2P33552 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CKS2P33552 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CKS2P33552 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
CKS2P33552 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CKS2P33552 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
CKS2P33552 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC12.96□□□□□ -0.34
CKS2P33552 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC12.96□□□□□ -0.34
CKS2P33552 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC12.96□□□□□ -0.34
CKS2P33552 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
CKS2P33552 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
CKS2P33552 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC12.96□□□□□ -0.34
CKS2P33552 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
CKS2P33552 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
CKS2P33552 GPAT2P1-201ENST00000444924 1672 ntBASIC12.96□□□□□ -0.34
CKS2P33552 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
CKS2P33552 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
CKS2P33552 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
CKS2P33552 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CKS2P33552 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms