Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CNGA1P29973 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CNGA1P29973 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CNGA1P29973 AC006504.4-201ENST00000592118 1568 ntBASIC19.97■□□□□ 0.79
CNGA1P29973 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC19.97■□□□□ 0.79
CNGA1P29973 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CNGA1P29973 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CNGA1P29973 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CNGA1P29973 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CNGA1P29973 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
CNGA1P29973 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CNGA1P29973 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CNGA1P29973 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
CNGA1P29973 AC103564.2-201ENST00000432853 1299 ntBASIC19.97■□□□□ 0.79
CNGA1P29973 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC19.97■□□□□ 0.79
CNGA1P29973 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC19.97■□□□□ 0.79
CNGA1P29973 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC19.97■□□□□ 0.79
CNGA1P29973 AL078644.1-201ENST00000609881 752 ntBASIC19.97■□□□□ 0.79
CNGA1P29973 C20orf181-201ENST00000623918 480 ntBASIC19.97■□□□□ 0.79
CNGA1P29973 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CNGA1P29973 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CNGA1P29973 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.97■□□□□ 0.79
CNGA1P29973 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CNGA1P29973 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CNGA1P29973 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CNGA1P29973 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CNGA1P29973 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CNGA1P29973 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.96■□□□□ 0.79
CNGA1P29973 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC19.96■□□□□ 0.79
CNGA1P29973 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
CNGA1P29973 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.96■□□□□ 0.79
CNGA1P29973 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CNGA1P29973 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.96■□□□□ 0.79
CNGA1P29973 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CNGA1P29973 ELK2BP-201ENST00000415014 1224 ntBASIC19.96■□□□□ 0.79
CNGA1P29973 CEND1P1-201ENST00000451006 455 ntBASIC19.96■□□□□ 0.79
CNGA1P29973 AC108073.2-201ENST00000464002 357 ntBASIC19.96■□□□□ 0.79
CNGA1P29973 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CNGA1P29973 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC19.96■□□□□ 0.79
CNGA1P29973 AL513190.1-201ENST00000621254 727 ntBASIC19.96■□□□□ 0.79
CNGA1P29973 AC004706.3-202ENST00000621574 984 ntBASIC19.96■□□□□ 0.79
CNGA1P29973 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CNGA1P29973 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.96■□□□□ 0.79
CNGA1P29973 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC19.96■□□□□ 0.79
CNGA1P29973 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
CNGA1P29973 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CNGA1P29973 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CNGA1P29973 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CNGA1P29973 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CNGA1P29973 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.96■□□□□ 0.79
CNGA1P29973 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.96■□□□□ 0.79
CNGA1P29973 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CNGA1P29973 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CNGA1P29973 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CNGA1P29973 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CNGA1P29973 SIRPAP1-201ENST00000448467 1770 ntBASIC19.95■□□□□ 0.78
CNGA1P29973 PHGDH-209ENST00000641074 1780 ntBASIC19.95■□□□□ 0.78
CNGA1P29973 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CNGA1P29973 BICD1-207ENST00000551848 1962 ntBASIC19.95■□□□□ 0.78
CNGA1P29973 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
CNGA1P29973 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CNGA1P29973 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CNGA1P29973 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CNGA1P29973 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CNGA1P29973 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CNGA1P29973 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CNGA1P29973 AL020989.1-201ENST00000422979 469 ntBASIC19.95■□□□□ 0.78
CNGA1P29973 AL645939.2-201ENST00000427340 991 ntBASIC19.95■□□□□ 0.78
CNGA1P29973 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
CNGA1P29973 VN2R19P-201ENST00000442399 1052 ntBASIC19.95■□□□□ 0.78
CNGA1P29973 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CNGA1P29973 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC19.95■□□□□ 0.78
CNGA1P29973 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
CNGA1P29973 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC19.95■□□□□ 0.78
CNGA1P29973 AP002472.1-201ENST00000577490 586 ntBASIC19.95■□□□□ 0.78
CNGA1P29973 CYB561-217ENST00000582997 877 ntTSL 5 BASIC19.95■□□□□ 0.78
CNGA1P29973 AC106028.4-201ENST00000614509 607 ntBASIC19.95■□□□□ 0.78
CNGA1P29973 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
CNGA1P29973 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
CNGA1P29973 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC19.95■□□□□ 0.78
CNGA1P29973 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CNGA1P29973 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.95■□□□□ 0.78
CNGA1P29973 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CNGA1P29973 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CNGA1P29973 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CNGA1P29973 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC19.95■□□□□ 0.78
CNGA1P29973 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CNGA1P29973 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC19.95■□□□□ 0.78
CNGA1P29973 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
CNGA1P29973 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CNGA1P29973 KRT8P47-201ENST00000604727 1398 ntBASIC19.95■□□□□ 0.78
CNGA1P29973 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
CNGA1P29973 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
CNGA1P29973 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CNGA1P29973 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CNGA1P29973 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CNGA1P29973 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
CNGA1P29973 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CNGA1P29973 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CNGA1P29973 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms