Protein–RNA interactions for Protein: P28222

HTR1B, 5-hydroxytryptamine receptor 1B, humanhuman

Predictions only

Length 390 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1BP28222 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.53■□□□□ 0.4
HTR1BP28222 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
HTR1BP28222 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HTR1BP28222 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HTR1BP28222 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HTR1BP28222 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HTR1BP28222 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HTR1BP28222 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
HTR1BP28222 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
HTR1BP28222 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HTR1BP28222 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
HTR1BP28222 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HTR1BP28222 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HTR1BP28222 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
HTR1BP28222 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HTR1BP28222 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
HTR1BP28222 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.52■□□□□ 0.4
HTR1BP28222 AL022342.1-201ENST00000400363 863 ntBASIC17.52■□□□□ 0.4
HTR1BP28222 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.52■□□□□ 0.4
HTR1BP28222 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.52■□□□□ 0.4
HTR1BP28222 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.52■□□□□ 0.4
HTR1BP28222 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.52■□□□□ 0.4
HTR1BP28222 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.52■□□□□ 0.4
HTR1BP28222 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.52■□□□□ 0.4
HTR1BP28222 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.52■□□□□ 0.4
HTR1BP28222 AL139288.1-201ENST00000623748 933 ntBASIC17.52■□□□□ 0.4
HTR1BP28222 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
HTR1BP28222 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.52■□□□□ 0.4
HTR1BP28222 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HTR1BP28222 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HTR1BP28222 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HTR1BP28222 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
HTR1BP28222 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
HTR1BP28222 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
HTR1BP28222 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.52■□□□□ 0.39
HTR1BP28222 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.52■□□□□ 0.39
HTR1BP28222 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
HTR1BP28222 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.52■□□□□ 0.39
HTR1BP28222 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HTR1BP28222 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
HTR1BP28222 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.52■□□□□ 0.39
HTR1BP28222 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.52■□□□□ 0.39
HTR1BP28222 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HTR1BP28222 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.51■□□□□ 0.39
HTR1BP28222 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HTR1BP28222 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HTR1BP28222 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HTR1BP28222 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HTR1BP28222 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HTR1BP28222 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.51■□□□□ 0.39
HTR1BP28222 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
HTR1BP28222 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.51■□□□□ 0.39
HTR1BP28222 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
HTR1BP28222 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.51■□□□□ 0.39
HTR1BP28222 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.51■□□□□ 0.39
HTR1BP28222 AC010460.3-201ENST00000511359 1579 ntBASIC17.51■□□□□ 0.39
HTR1BP28222 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
HTR1BP28222 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.51■□□□□ 0.39
HTR1BP28222 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.51■□□□□ 0.39
HTR1BP28222 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.51■□□□□ 0.39
HTR1BP28222 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
HTR1BP28222 AC120114.3-201ENST00000611923 658 ntBASIC17.51■□□□□ 0.39
HTR1BP28222 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.51■□□□□ 0.39
HTR1BP28222 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
HTR1BP28222 BX640515.1-201ENST00000617215 977 ntBASIC17.51■□□□□ 0.39
HTR1BP28222 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HTR1BP28222 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
HTR1BP28222 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
HTR1BP28222 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HTR1BP28222 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
HTR1BP28222 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HTR1BP28222 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
HTR1BP28222 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HTR1BP28222 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.5■□□□□ 0.39
HTR1BP28222 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.5■□□□□ 0.39
HTR1BP28222 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HTR1BP28222 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HTR1BP28222 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.5■□□□□ 0.39
HTR1BP28222 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.5■□□□□ 0.39
HTR1BP28222 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HTR1BP28222 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
HTR1BP28222 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HTR1BP28222 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HTR1BP28222 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.5■□□□□ 0.39
HTR1BP28222 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HTR1BP28222 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
HTR1BP28222 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HTR1BP28222 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
HTR1BP28222 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HTR1BP28222 AL590627.1-203ENST00000421194 1026 ntBASIC17.5■□□□□ 0.39
HTR1BP28222 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.5■□□□□ 0.39
HTR1BP28222 AC018712.1-201ENST00000455767 687 ntBASIC17.5■□□□□ 0.39
HTR1BP28222 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HTR1BP28222 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HTR1BP28222 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.5■□□□□ 0.39
HTR1BP28222 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HTR1BP28222 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.5■□□□□ 0.39
HTR1BP28222 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.5■□□□□ 0.39
HTR1BP28222 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.5■□□□□ 0.39
HTR1BP28222 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms