Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
KCNA3P22001 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
KCNA3P22001 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
KCNA3P22001 AC009949.1-201ENST00000623048 1830 ntBASIC21.37■■□□□ 1.01
KCNA3P22001 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
KCNA3P22001 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
KCNA3P22001 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC21.37■■□□□ 1.01
KCNA3P22001 MRPS18AP1-201ENST00000414458 589 ntBASIC21.37■■□□□ 1.01
KCNA3P22001 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
KCNA3P22001 COX5BP8-201ENST00000416911 349 ntBASIC21.37■■□□□ 1.01
KCNA3P22001 AC092580.3-201ENST00000430932 139 ntBASIC21.37■■□□□ 1.01
KCNA3P22001 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC21.37■■□□□ 1.01
KCNA3P22001 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC21.37■■□□□ 1.01
KCNA3P22001 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC21.37■■□□□ 1.01
KCNA3P22001 AL662799.1-202ENST00000614205 422 ntBASIC21.37■■□□□ 1.01
KCNA3P22001 HARS-203ENST00000431330 1774 ntTSL 2 BASIC21.37■■□□□ 1.01
KCNA3P22001 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
KCNA3P22001 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
KCNA3P22001 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
KCNA3P22001 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
KCNA3P22001 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
KCNA3P22001 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC21.36■■□□□ 1.01
KCNA3P22001 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
KCNA3P22001 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
KCNA3P22001 AC129492.6-201ENST00000611383 1305 ntBASIC21.36■■□□□ 1.01
KCNA3P22001 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
KCNA3P22001 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
KCNA3P22001 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
KCNA3P22001 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC21.36■■□□□ 1.01
KCNA3P22001 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC21.36■■□□□ 1.01
KCNA3P22001 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC21.36■■□□□ 1.01
KCNA3P22001 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC21.36■■□□□ 1.01
KCNA3P22001 IGHV3-42-201ENST00000520410 361 ntBASIC21.36■■□□□ 1.01
KCNA3P22001 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
KCNA3P22001 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC21.36■■□□□ 1.01
KCNA3P22001 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC21.36■■□□□ 1.01
KCNA3P22001 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
KCNA3P22001 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC21.36■■□□□ 1.01
KCNA3P22001 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
KCNA3P22001 COQ6-210ENST00000554920 649 ntTSL 3 BASIC21.36■■□□□ 1.01
KCNA3P22001 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC21.36■■□□□ 1.01
KCNA3P22001 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
KCNA3P22001 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
KCNA3P22001 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC21.36■■□□□ 1.01
KCNA3P22001 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
KCNA3P22001 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
KCNA3P22001 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
KCNA3P22001 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
KCNA3P22001 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
KCNA3P22001 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC21.36■■□□□ 1.01
KCNA3P22001 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
KCNA3P22001 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
KCNA3P22001 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
KCNA3P22001 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.35■■□□□ 1.01
KCNA3P22001 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
KCNA3P22001 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
KCNA3P22001 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
KCNA3P22001 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
KCNA3P22001 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
KCNA3P22001 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
KCNA3P22001 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
KCNA3P22001 AC087163.2-201ENST00000457299 853 ntBASIC21.35■■□□□ 1.01
KCNA3P22001 AC002558.1-201ENST00000488906 803 ntBASIC21.35■■□□□ 1.01
KCNA3P22001 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC21.35■■□□□ 1.01
KCNA3P22001 THTPA-204ENST00000554970 569 ntTSL 4 BASIC21.35■■□□□ 1.01
KCNA3P22001 THTPA-206ENST00000556015 535 ntTSL 3 BASIC21.35■■□□□ 1.01
KCNA3P22001 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC21.35■■□□□ 1.01
KCNA3P22001 RARRES2P8-201ENST00000566335 367 ntBASIC21.35■■□□□ 1.01
KCNA3P22001 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC21.35■■□□□ 1.01
KCNA3P22001 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
KCNA3P22001 AL645728.2-201ENST00000641974 660 ntBASIC21.35■■□□□ 1.01
KCNA3P22001 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
KCNA3P22001 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC21.35■■□□□ 1.01
KCNA3P22001 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
KCNA3P22001 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
KCNA3P22001 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
KCNA3P22001 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
KCNA3P22001 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC21.35■■□□□ 1.01
KCNA3P22001 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
KCNA3P22001 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC21.35■■□□□ 1.01
KCNA3P22001 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC21.35■■□□□ 1.01
KCNA3P22001 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
KCNA3P22001 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
KCNA3P22001 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
KCNA3P22001 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC21.34■■□□□ 1.01
KCNA3P22001 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC21.34■■□□□ 1.01
KCNA3P22001 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC21.34■■□□□ 1.01
KCNA3P22001 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC21.34■■□□□ 1.01
KCNA3P22001 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
KCNA3P22001 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
KCNA3P22001 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC21.34■■□□□ 1.01
KCNA3P22001 PPP6R2P1-201ENST00000450880 1275 ntBASIC21.34■■□□□ 1.01
KCNA3P22001 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC21.34■■□□□ 1.01
KCNA3P22001 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC21.34■■□□□ 1.01
KCNA3P22001 AC004890.2-204ENST00000481968 304 ntBASIC21.34■■□□□ 1.01
KCNA3P22001 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC21.34■■□□□ 1.01
KCNA3P22001 COQ9-214ENST00000567933 882 ntTSL 3 BASIC21.34■■□□□ 1.01
KCNA3P22001 AL358472.5-202ENST00000641448 1267 ntBASIC21.34■■□□□ 1.01
KCNA3P22001 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
KCNA3P22001 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms