Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BRAFP15056 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
BRAFP15056 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BRAFP15056 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BRAFP15056 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BRAFP15056 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.11■□□□□ 0.49
BRAFP15056 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.11■□□□□ 0.49
BRAFP15056 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
BRAFP15056 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.11■□□□□ 0.49
BRAFP15056 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.11■□□□□ 0.49
BRAFP15056 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.11■□□□□ 0.49
BRAFP15056 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
BRAFP15056 AC079602.3-201ENST00000623931 403 ntBASIC18.11■□□□□ 0.49
BRAFP15056 AL358472.4-201ENST00000633140 710 ntBASIC18.11■□□□□ 0.49
BRAFP15056 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
BRAFP15056 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BRAFP15056 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
BRAFP15056 LINC01311-201ENST00000565162 1445 ntBASIC18.11■□□□□ 0.49
BRAFP15056 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
BRAFP15056 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
BRAFP15056 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.11■□□□□ 0.49
BRAFP15056 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BRAFP15056 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BRAFP15056 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
BRAFP15056 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
BRAFP15056 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.11■□□□□ 0.49
BRAFP15056 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
BRAFP15056 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.1■□□□□ 0.49
BRAFP15056 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.1■□□□□ 0.49
BRAFP15056 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
BRAFP15056 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
BRAFP15056 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
BRAFP15056 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
BRAFP15056 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.1■□□□□ 0.49
BRAFP15056 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.1■□□□□ 0.49
BRAFP15056 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
BRAFP15056 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
BRAFP15056 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.1■□□□□ 0.49
BRAFP15056 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
BRAFP15056 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.1■□□□□ 0.49
BRAFP15056 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
BRAFP15056 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
BRAFP15056 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
BRAFP15056 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
BRAFP15056 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.1■□□□□ 0.49
BRAFP15056 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.1■□□□□ 0.49
BRAFP15056 HBZP1-201ENST00000354915 429 ntBASIC18.1■□□□□ 0.49
BRAFP15056 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
BRAFP15056 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.1■□□□□ 0.49
BRAFP15056 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.1■□□□□ 0.49
BRAFP15056 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.1■□□□□ 0.49
BRAFP15056 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
BRAFP15056 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.1■□□□□ 0.49
BRAFP15056 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.1■□□□□ 0.49
BRAFP15056 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
BRAFP15056 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
BRAFP15056 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.1■□□□□ 0.49
BRAFP15056 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
BRAFP15056 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
BRAFP15056 AC100803.2-201ENST00000562459 1963 ntBASIC18.1■□□□□ 0.49
BRAFP15056 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
BRAFP15056 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
BRAFP15056 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.09■□□□□ 0.49
BRAFP15056 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BRAFP15056 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
BRAFP15056 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
BRAFP15056 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
BRAFP15056 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
BRAFP15056 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
BRAFP15056 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BRAFP15056 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.09■□□□□ 0.49
BRAFP15056 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BRAFP15056 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BRAFP15056 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
BRAFP15056 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BRAFP15056 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.09■□□□□ 0.49
BRAFP15056 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.09■□□□□ 0.49
BRAFP15056 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BRAFP15056 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.09■□□□□ 0.49
BRAFP15056 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.09■□□□□ 0.49
BRAFP15056 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
BRAFP15056 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
BRAFP15056 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.09■□□□□ 0.49
BRAFP15056 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
BRAFP15056 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
BRAFP15056 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
BRAFP15056 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BRAFP15056 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BRAFP15056 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
BRAFP15056 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.09■□□□□ 0.49
BRAFP15056 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BRAFP15056 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
BRAFP15056 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BRAFP15056 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
BRAFP15056 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
BRAFP15056 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BRAFP15056 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC18.09■□□□□ 0.49
BRAFP15056 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
BRAFP15056 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
BRAFP15056 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms