Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC29.79■■■□□ 2.36
CFTRP13569 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
CFTRP13569 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC29.78■■■□□ 2.36
CFTRP13569 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC29.78■■■□□ 2.36
CFTRP13569 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
CFTRP13569 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC29.78■■■□□ 2.36
CFTRP13569 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC29.78■■■□□ 2.36
CFTRP13569 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
CFTRP13569 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC29.78■■■□□ 2.36
CFTRP13569 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
CFTRP13569 AC109635.5-201ENST00000533593 962 ntBASIC29.78■■■□□ 2.36
CFTRP13569 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC29.78■■■□□ 2.36
CFTRP13569 NOP2-220ENST00000545915 630 ntTSL 2 BASIC29.78■■■□□ 2.36
CFTRP13569 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
CFTRP13569 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC29.77■■■□□ 2.36
CFTRP13569 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
CFTRP13569 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC29.77■■■□□ 2.36
CFTRP13569 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
CFTRP13569 AC046185.3-201ENST00000623228 1824 ntBASIC29.77■■■□□ 2.36
CFTRP13569 GNAS-203ENST00000306120 1878 ntBASIC29.77■■■□□ 2.36
CFTRP13569 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC29.77■■■□□ 2.36
CFTRP13569 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC29.77■■■□□ 2.36
CFTRP13569 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC29.77■■■□□ 2.36
CFTRP13569 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC29.77■■■□□ 2.36
CFTRP13569 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC29.77■■■□□ 2.36
CFTRP13569 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC29.77■■■□□ 2.36
CFTRP13569 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC29.77■■■□□ 2.36
CFTRP13569 SRP9-204ENST00000619790 377 ntTSL 2 BASIC29.77■■■□□ 2.36
CFTRP13569 AL161645.1-201ENST00000622716 1255 ntBASIC29.77■■■□□ 2.36
CFTRP13569 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
CFTRP13569 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
CFTRP13569 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC29.77■■■□□ 2.36
CFTRP13569 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC29.76■■■□□ 2.36
CFTRP13569 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
CFTRP13569 HMGA1P7-201ENST00000406908 502 ntBASIC29.76■■■□□ 2.35
CFTRP13569 TSSK5P-201ENST00000423978 907 ntBASIC29.76■■■□□ 2.35
CFTRP13569 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC29.76■■■□□ 2.35
CFTRP13569 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
CFTRP13569 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC29.76■■■□□ 2.35
CFTRP13569 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
CFTRP13569 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC29.76■■■□□ 2.35
CFTRP13569 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC29.76■■■□□ 2.35
CFTRP13569 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC29.76■■■□□ 2.35
CFTRP13569 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
CFTRP13569 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
CFTRP13569 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
CFTRP13569 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC29.75■■■□□ 2.35
CFTRP13569 TDG-209ENST00000544861 1387 ntTSL 2 BASIC29.75■■■□□ 2.35
CFTRP13569 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
CFTRP13569 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC29.75■■■□□ 2.35
CFTRP13569 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC29.75■■■□□ 2.35
CFTRP13569 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC29.75■■■□□ 2.35
CFTRP13569 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC29.75■■■□□ 2.35
CFTRP13569 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
CFTRP13569 IGHV3-42-201ENST00000520410 361 ntBASIC29.75■■■□□ 2.35
CFTRP13569 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC29.75■■■□□ 2.35
CFTRP13569 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC29.75■■■□□ 2.35
CFTRP13569 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
CFTRP13569 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC29.75■■■□□ 2.35
CFTRP13569 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
CFTRP13569 CROCCP3-202ENST00000420820 1947 ntBASIC29.75■■■□□ 2.35
CFTRP13569 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC29.74■■■□□ 2.35
CFTRP13569 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
CFTRP13569 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
CFTRP13569 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC29.74■■■□□ 2.35
CFTRP13569 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC29.74■■■□□ 2.35
CFTRP13569 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC29.74■■■□□ 2.35
CFTRP13569 AL596325.1-201ENST00000563991 1082 ntBASIC29.74■■■□□ 2.35
CFTRP13569 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
CFTRP13569 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
CFTRP13569 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC29.74■■■□□ 2.35
CFTRP13569 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
CFTRP13569 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
CFTRP13569 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
CFTRP13569 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC29.74■■■□□ 2.35
CFTRP13569 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC29.74■■■□□ 2.35
CFTRP13569 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC29.74■■■□□ 2.35
CFTRP13569 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC29.74■■■□□ 2.35
CFTRP13569 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC29.74■■■□□ 2.35
CFTRP13569 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
CFTRP13569 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC29.74■■■□□ 2.35
CFTRP13569 MIR6080-201ENST00000617359 66 ntBASIC29.74■■■□□ 2.35
CFTRP13569 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC29.74■■■□□ 2.35
CFTRP13569 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
CFTRP13569 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
CFTRP13569 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC29.73■■■□□ 2.35
CFTRP13569 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC29.73■■■□□ 2.35
CFTRP13569 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC29.73■■■□□ 2.35
CFTRP13569 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC29.73■■■□□ 2.35
CFTRP13569 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
CFTRP13569 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC29.73■■■□□ 2.35
CFTRP13569 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC29.73■■■□□ 2.35
CFTRP13569 AL358472.5-202ENST00000641448 1267 ntBASIC29.73■■■□□ 2.35
CFTRP13569 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
CFTRP13569 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
CFTRP13569 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC29.72■■■□□ 2.35
CFTRP13569 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC29.72■■■□□ 2.35
CFTRP13569 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC29.72■■■□□ 2.35
CFTRP13569 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
CFTRP13569 NME2P1-201ENST00000426182 414 ntBASIC29.72■■■□□ 2.35
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms