Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC15.46■□□□□ 0.07
UBCP0CG48 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
UBCP0CG48 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
UBCP0CG48 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
UBCP0CG48 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
UBCP0CG48 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
UBCP0CG48 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
UBCP0CG48 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
UBCP0CG48 DDT-203ENST00000403754 569 ntTSL 3 BASIC15.46■□□□□ 0.07
UBCP0CG48 DDT-206ENST00000430101 573 ntTSL 2 BASIC15.46■□□□□ 0.07
UBCP0CG48 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC15.46■□□□□ 0.07
UBCP0CG48 RASA4DP-201ENST00000460726 1199 ntBASIC15.46■□□□□ 0.07
UBCP0CG48 TMA16-209ENST00000513272 803 ntTSL 2 BASIC15.46■□□□□ 0.07
UBCP0CG48 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
UBCP0CG48 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC15.46■□□□□ 0.07
UBCP0CG48 AL136038.4-201ENST00000603606 1261 ntBASIC15.46■□□□□ 0.07
UBCP0CG48 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
UBCP0CG48 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
UBCP0CG48 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
UBCP0CG48 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.46■□□□□ 0.07
UBCP0CG48 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
UBCP0CG48 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
UBCP0CG48 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
UBCP0CG48 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
UBCP0CG48 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC15.46■□□□□ 0.07
UBCP0CG48 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.06
UBCP0CG48 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
UBCP0CG48 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.46■□□□□ 0.06
UBCP0CG48 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
UBCP0CG48 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
UBCP0CG48 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC15.45■□□□□ 0.06
UBCP0CG48 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
UBCP0CG48 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
UBCP0CG48 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
UBCP0CG48 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
UBCP0CG48 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
UBCP0CG48 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.45■□□□□ 0.06
UBCP0CG48 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
UBCP0CG48 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
UBCP0CG48 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
UBCP0CG48 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
UBCP0CG48 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC15.45■□□□□ 0.06
UBCP0CG48 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC15.45■□□□□ 0.06
UBCP0CG48 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
UBCP0CG48 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
UBCP0CG48 AL031432.5-201ENST00000641059 760 ntBASIC15.45■□□□□ 0.06
UBCP0CG48 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
UBCP0CG48 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
UBCP0CG48 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
UBCP0CG48 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
UBCP0CG48 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
UBCP0CG48 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
UBCP0CG48 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
UBCP0CG48 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC15.45■□□□□ 0.06
UBCP0CG48 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
UBCP0CG48 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
UBCP0CG48 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
UBCP0CG48 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
UBCP0CG48 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
UBCP0CG48 AL391807.1-203ENST00000604392 2365 ntBASIC15.44■□□□□ 0.06
UBCP0CG48 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
UBCP0CG48 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
UBCP0CG48 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
UBCP0CG48 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
UBCP0CG48 AC016396.2-201ENST00000562575 1417 ntBASIC15.44■□□□□ 0.06
UBCP0CG48 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
UBCP0CG48 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
UBCP0CG48 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.44■□□□□ 0.06
UBCP0CG48 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
UBCP0CG48 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.44■□□□□ 0.06
UBCP0CG48 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
UBCP0CG48 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
UBCP0CG48 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
UBCP0CG48 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
UBCP0CG48 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
UBCP0CG48 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
UBCP0CG48 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.44■□□□□ 0.06
UBCP0CG48 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
UBCP0CG48 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
UBCP0CG48 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
UBCP0CG48 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
UBCP0CG48 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC15.44■□□□□ 0.06
UBCP0CG48 TSPY12P-201ENST00000421279 868 ntBASIC15.44■□□□□ 0.06
UBCP0CG48 KRT18P48-201ENST00000434763 852 ntBASIC15.44■□□□□ 0.06
UBCP0CG48 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC15.44■□□□□ 0.06
UBCP0CG48 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC15.44■□□□□ 0.06
UBCP0CG48 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC15.44■□□□□ 0.06
UBCP0CG48 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC15.44■□□□□ 0.06
UBCP0CG48 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC15.44■□□□□ 0.06
UBCP0CG48 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
UBCP0CG48 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
UBCP0CG48 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
UBCP0CG48 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
UBCP0CG48 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
UBCP0CG48 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
UBCP0CG48 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
UBCP0CG48 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
UBCP0CG48 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
UBCP0CG48 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
UBCP0CG48 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms