Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.22■□□□□ 0.51
CD48P09326 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CD48P09326 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
CD48P09326 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CD48P09326 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
CD48P09326 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CD48P09326 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.22■□□□□ 0.51
CD48P09326 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CD48P09326 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CD48P09326 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.22■□□□□ 0.51
CD48P09326 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CD48P09326 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CD48P09326 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CD48P09326 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CD48P09326 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CD48P09326 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.21■□□□□ 0.51
CD48P09326 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CD48P09326 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CD48P09326 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.21■□□□□ 0.51
CD48P09326 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CD48P09326 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CD48P09326 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CD48P09326 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.21■□□□□ 0.51
CD48P09326 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.21■□□□□ 0.51
CD48P09326 TOB2P1-201ENST00000469761 992 ntBASIC18.21■□□□□ 0.51
CD48P09326 AC002558.1-201ENST00000488906 803 ntBASIC18.21■□□□□ 0.51
CD48P09326 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.21■□□□□ 0.51
CD48P09326 MIR3180-1-201ENST00000580374 94 ntBASIC18.21■□□□□ 0.51
CD48P09326 MIR3180-3-201ENST00000584616 94 ntBASIC18.21■□□□□ 0.51
CD48P09326 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.21■□□□□ 0.51
CD48P09326 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CD48P09326 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CD48P09326 AC010331.1-201ENST00000611423 582 ntBASIC18.21■□□□□ 0.51
CD48P09326 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CD48P09326 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CD48P09326 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CD48P09326 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.21■□□□□ 0.51
CD48P09326 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CD48P09326 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CD48P09326 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CD48P09326 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CD48P09326 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CD48P09326 AL049757.1-201ENST00000616842 1596 ntBASIC18.21■□□□□ 0.51
CD48P09326 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CD48P09326 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.2■□□□□ 0.5
CD48P09326 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CD48P09326 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.2■□□□□ 0.5
CD48P09326 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.2■□□□□ 0.5
CD48P09326 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CD48P09326 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CD48P09326 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CD48P09326 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CD48P09326 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.2■□□□□ 0.5
CD48P09326 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CD48P09326 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CD48P09326 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.2■□□□□ 0.5
CD48P09326 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CD48P09326 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
CD48P09326 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.2■□□□□ 0.5
CD48P09326 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CD48P09326 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CD48P09326 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.2■□□□□ 0.5
CD48P09326 DRAXINP1-201ENST00000437611 948 ntBASIC18.2■□□□□ 0.5
CD48P09326 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.2■□□□□ 0.5
CD48P09326 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.2■□□□□ 0.5
CD48P09326 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.2■□□□□ 0.5
CD48P09326 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.2■□□□□ 0.5
CD48P09326 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.2■□□□□ 0.5
CD48P09326 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.2■□□□□ 0.5
CD48P09326 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CD48P09326 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.2■□□□□ 0.5
CD48P09326 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.2■□□□□ 0.5
CD48P09326 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CD48P09326 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.2■□□□□ 0.5
CD48P09326 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.2■□□□□ 0.5
CD48P09326 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CD48P09326 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CD48P09326 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
CD48P09326 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CD48P09326 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CD48P09326 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CD48P09326 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CD48P09326 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
CD48P09326 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.2■□□□□ 0.5
CD48P09326 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
CD48P09326 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.2■□□□□ 0.5
CD48P09326 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.2■□□□□ 0.5
CD48P09326 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CD48P09326 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.2■□□□□ 0.5
CD48P09326 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.2■□□□□ 0.5
CD48P09326 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CD48P09326 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CD48P09326 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CD48P09326 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.19■□□□□ 0.5
CD48P09326 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
CD48P09326 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CD48P09326 AC138932.1-201ENST00000534164 6830 ntBASIC18.19■□□□□ 0.5
CD48P09326 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CD48P09326 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CD48P09326 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms