Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CTSDP07339 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CTSDP07339 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CTSDP07339 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC14.63□□□□□ -0.07
CTSDP07339 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CTSDP07339 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CTSDP07339 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CTSDP07339 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CTSDP07339 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CTSDP07339 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CTSDP07339 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CTSDP07339 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC14.62□□□□□ -0.07
CTSDP07339 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CTSDP07339 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CTSDP07339 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CTSDP07339 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CTSDP07339 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC14.62□□□□□ -0.07
CTSDP07339 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CTSDP07339 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC14.62□□□□□ -0.07
CTSDP07339 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC14.62□□□□□ -0.07
CTSDP07339 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CTSDP07339 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CTSDP07339 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CTSDP07339 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC14.62□□□□□ -0.07
CTSDP07339 CCR12P-201ENST00000446203 998 ntBASIC14.62□□□□□ -0.07
CTSDP07339 SEC1P-202ENST00000473944 940 ntBASIC14.62□□□□□ -0.07
CTSDP07339 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CTSDP07339 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CTSDP07339 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CTSDP07339 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC14.62□□□□□ -0.07
CTSDP07339 AC092338.2-201ENST00000568827 1415 ntBASIC14.62□□□□□ -0.07
CTSDP07339 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC14.62□□□□□ -0.07
CTSDP07339 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC14.62□□□□□ -0.07
CTSDP07339 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC14.62□□□□□ -0.07
CTSDP07339 REXO1L10P-201ENST00000615707 1290 ntBASIC14.62□□□□□ -0.07
CTSDP07339 REXO1L12P-201ENST00000622156 912 ntBASIC14.62□□□□□ -0.07
CTSDP07339 DECR2-212ENST00000627716 352 ntTSL 2 BASIC14.62□□□□□ -0.07
CTSDP07339 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CTSDP07339 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CTSDP07339 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CTSDP07339 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC14.62□□□□□ -0.07
CTSDP07339 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CTSDP07339 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CTSDP07339 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CTSDP07339 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CTSDP07339 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CTSDP07339 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CTSDP07339 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CTSDP07339 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CTSDP07339 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
CTSDP07339 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC14.62□□□□□ -0.07
CTSDP07339 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CTSDP07339 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC14.61□□□□□ -0.07
CTSDP07339 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CTSDP07339 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CTSDP07339 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CTSDP07339 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CTSDP07339 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC14.61□□□□□ -0.07
CTSDP07339 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CTSDP07339 LINC02012-201ENST00000608206 1725 ntBASIC14.61□□□□□ -0.07
CTSDP07339 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CTSDP07339 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC14.61□□□□□ -0.07
CTSDP07339 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC14.61□□□□□ -0.07
CTSDP07339 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC14.61□□□□□ -0.07
CTSDP07339 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CTSDP07339 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC14.61□□□□□ -0.07
CTSDP07339 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CTSDP07339 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CTSDP07339 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CTSDP07339 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC14.61□□□□□ -0.07
CTSDP07339 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CTSDP07339 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC14.61□□□□□ -0.07
CTSDP07339 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CTSDP07339 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
CTSDP07339 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CTSDP07339 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CTSDP07339 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
CTSDP07339 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CTSDP07339 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CTSDP07339 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CTSDP07339 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CTSDP07339 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CTSDP07339 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
CTSDP07339 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CTSDP07339 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
CTSDP07339 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC14.61□□□□□ -0.07
CTSDP07339 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CTSDP07339 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
CTSDP07339 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CTSDP07339 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC14.61□□□□□ -0.07
CTSDP07339 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CTSDP07339 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CTSDP07339 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CTSDP07339 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
CTSDP07339 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CTSDP07339 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CTSDP07339 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CTSDP07339 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
CTSDP07339 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC14.6□□□□□ -0.07
CTSDP07339 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms