Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AKAP8P1-201ENST00000434743 1349 ntBASIC22.92■■□□□ 1.26
COL5A2P05997 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
COL5A2P05997 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC22.92■■□□□ 1.26
COL5A2P05997 AC140878.1-201ENST00000565277 250 ntBASIC22.92■■□□□ 1.26
COL5A2P05997 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC22.92■■□□□ 1.26
COL5A2P05997 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
COL5A2P05997 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
COL5A2P05997 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
COL5A2P05997 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC22.91■■□□□ 1.26
COL5A2P05997 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC22.91■■□□□ 1.26
COL5A2P05997 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
COL5A2P05997 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC22.91■■□□□ 1.26
COL5A2P05997 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
COL5A2P05997 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
COL5A2P05997 AC063926.2-201ENST00000623766 1308 ntBASIC22.91■■□□□ 1.26
COL5A2P05997 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
COL5A2P05997 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC22.91■■□□□ 1.26
COL5A2P05997 TREML5P-201ENST00000421694 576 ntBASIC22.91■■□□□ 1.26
COL5A2P05997 GAPDHP21-201ENST00000450301 1010 ntBASIC22.91■■□□□ 1.26
COL5A2P05997 BAD-207ENST00000544785 525 ntTSL 3 BASIC22.91■■□□□ 1.26
COL5A2P05997 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC22.91■■□□□ 1.26
COL5A2P05997 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC22.91■■□□□ 1.26
COL5A2P05997 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC22.91■■□□□ 1.26
COL5A2P05997 AC008761.3-201ENST00000624803 892 ntBASIC22.91■■□□□ 1.26
COL5A2P05997 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC22.91■■□□□ 1.26
COL5A2P05997 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
COL5A2P05997 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC22.9■■□□□ 1.26
COL5A2P05997 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
COL5A2P05997 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
COL5A2P05997 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC22.9■■□□□ 1.26
COL5A2P05997 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
COL5A2P05997 RAC2-204ENST00000406508 893 ntTSL 5 BASIC22.9■■□□□ 1.26
COL5A2P05997 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
COL5A2P05997 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC22.9■■□□□ 1.26
COL5A2P05997 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
COL5A2P05997 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
COL5A2P05997 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC22.9■■□□□ 1.26
COL5A2P05997 AL390754.1-201ENST00000619088 582 ntBASIC22.9■■□□□ 1.26
COL5A2P05997 RAB34-224ENST00000636513 888 ntTSL 5 BASIC22.9■■□□□ 1.26
COL5A2P05997 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
COL5A2P05997 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
COL5A2P05997 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
COL5A2P05997 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC22.89■■□□□ 1.26
COL5A2P05997 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC22.89■■□□□ 1.26
COL5A2P05997 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
COL5A2P05997 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC22.89■■□□□ 1.26
COL5A2P05997 AC135776.1-201ENST00000319817 2481 ntBASIC22.89■■□□□ 1.26
COL5A2P05997 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
COL5A2P05997 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.26
COL5A2P05997 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC22.89■■□□□ 1.26
COL5A2P05997 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
COL5A2P05997 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC22.89■■□□□ 1.25
COL5A2P05997 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC22.89■■□□□ 1.25
COL5A2P05997 MMP17-203ENST00000535004 719 ntTSL 3 BASIC22.89■■□□□ 1.25
COL5A2P05997 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
COL5A2P05997 DUX4L17-201ENST00000557360 1267 ntBASIC22.89■■□□□ 1.25
COL5A2P05997 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
COL5A2P05997 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC22.89■■□□□ 1.25
COL5A2P05997 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC22.89■■□□□ 1.25
COL5A2P05997 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.25
COL5A2P05997 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC22.89■■□□□ 1.25
COL5A2P05997 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC22.89■■□□□ 1.25
COL5A2P05997 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
COL5A2P05997 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC22.89■■□□□ 1.25
COL5A2P05997 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
COL5A2P05997 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC22.89■■□□□ 1.25
COL5A2P05997 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
COL5A2P05997 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
COL5A2P05997 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC22.88■■□□□ 1.25
COL5A2P05997 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
COL5A2P05997 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
COL5A2P05997 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
COL5A2P05997 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
COL5A2P05997 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC22.88■■□□□ 1.25
COL5A2P05997 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC22.88■■□□□ 1.25
COL5A2P05997 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC22.88■■□□□ 1.25
COL5A2P05997 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC22.88■■□□□ 1.25
COL5A2P05997 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC22.88■■□□□ 1.25
COL5A2P05997 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC22.88■■□□□ 1.25
COL5A2P05997 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC22.88■■□□□ 1.25
COL5A2P05997 AL158211.3-201ENST00000607385 239 ntBASIC22.88■■□□□ 1.25
COL5A2P05997 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC22.88■■□□□ 1.25
COL5A2P05997 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
COL5A2P05997 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC22.88■■□□□ 1.25
COL5A2P05997 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
COL5A2P05997 AL020996.1-203ENST00000536896 2307 ntBASIC22.88■■□□□ 1.25
COL5A2P05997 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
COL5A2P05997 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC22.87■■□□□ 1.25
COL5A2P05997 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC22.87■■□□□ 1.25
COL5A2P05997 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
COL5A2P05997 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC22.87■■□□□ 1.25
COL5A2P05997 RBPMS2P1-201ENST00000437762 623 ntBASIC22.87■■□□□ 1.25
COL5A2P05997 SLC25A39P2-201ENST00000537614 270 ntBASIC22.87■■□□□ 1.25
COL5A2P05997 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC22.87■■□□□ 1.25
COL5A2P05997 AC084121.4-201ENST00000641598 221 ntBASIC22.87■■□□□ 1.25
COL5A2P05997 AF228730.8-201ENST00000642140 221 ntBASIC22.87■■□□□ 1.25
COL5A2P05997 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
COL5A2P05997 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC22.87■■□□□ 1.25
COL5A2P05997 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
COL5A2P05997 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC22.87■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms