Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MBD3O95983 REXO1L10P-201ENST00000615707 1290 ntBASIC20.18■□□□□ 0.82
MBD3O95983 REXO1L12P-201ENST00000622156 912 ntBASIC20.18■□□□□ 0.82
MBD3O95983 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
MBD3O95983 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC20.18■□□□□ 0.82
MBD3O95983 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
MBD3O95983 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MBD3O95983 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC20.18■□□□□ 0.82
MBD3O95983 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
MBD3O95983 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
MBD3O95983 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MBD3O95983 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
MBD3O95983 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC20.17■□□□□ 0.82
MBD3O95983 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
MBD3O95983 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
MBD3O95983 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
MBD3O95983 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MBD3O95983 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
MBD3O95983 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MBD3O95983 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
MBD3O95983 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
MBD3O95983 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
MBD3O95983 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
MBD3O95983 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MBD3O95983 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
MBD3O95983 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.17■□□□□ 0.82
MBD3O95983 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
MBD3O95983 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
MBD3O95983 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC20.17■□□□□ 0.82
MBD3O95983 WT1-209ENST00000530998 2421 ntTSL 2 BASIC20.17■□□□□ 0.82
MBD3O95983 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC20.17■□□□□ 0.82
MBD3O95983 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MBD3O95983 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC20.17■□□□□ 0.82
MBD3O95983 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
MBD3O95983 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
MBD3O95983 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MBD3O95983 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
MBD3O95983 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
MBD3O95983 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC20.17■□□□□ 0.82
MBD3O95983 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
MBD3O95983 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
MBD3O95983 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
MBD3O95983 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MBD3O95983 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC20.16■□□□□ 0.82
MBD3O95983 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MBD3O95983 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.16■□□□□ 0.82
MBD3O95983 AC008894.3-201ENST00000624324 3103 ntBASIC20.16■□□□□ 0.82
MBD3O95983 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MBD3O95983 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC20.16■□□□□ 0.82
MBD3O95983 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
MBD3O95983 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.16■□□□□ 0.82
MBD3O95983 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
MBD3O95983 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC20.16■□□□□ 0.82
MBD3O95983 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC20.16■□□□□ 0.82
MBD3O95983 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC20.16■□□□□ 0.82
MBD3O95983 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MBD3O95983 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
MBD3O95983 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC20.16■□□□□ 0.82
MBD3O95983 HLA-L-209ENST00000420110 1011 ntBASIC20.16■□□□□ 0.82
MBD3O95983 CCR12P-201ENST00000446203 998 ntBASIC20.16■□□□□ 0.82
MBD3O95983 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.16■□□□□ 0.82
MBD3O95983 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.16■□□□□ 0.82
MBD3O95983 AL139327.4-201ENST00000612362 153 ntBASIC20.16■□□□□ 0.82
MBD3O95983 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.16■□□□□ 0.82
MBD3O95983 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MBD3O95983 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
MBD3O95983 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC20.16■□□□□ 0.82
MBD3O95983 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MBD3O95983 PBK-203ENST00000522944 1499 ntTSL 2 BASIC20.16■□□□□ 0.82
MBD3O95983 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MBD3O95983 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
MBD3O95983 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MBD3O95983 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MBD3O95983 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
MBD3O95983 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MBD3O95983 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MBD3O95983 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MBD3O95983 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MBD3O95983 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MBD3O95983 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC20.16■□□□□ 0.82
MBD3O95983 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
MBD3O95983 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC20.15■□□□□ 0.82
MBD3O95983 GCK-209ENST00000616242 2260 ntTSL 5 BASIC20.15■□□□□ 0.82
MBD3O95983 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MBD3O95983 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
MBD3O95983 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MBD3O95983 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
MBD3O95983 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MBD3O95983 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC20.15■□□□□ 0.82
MBD3O95983 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.15■□□□□ 0.82
MBD3O95983 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.15■□□□□ 0.82
MBD3O95983 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
MBD3O95983 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
MBD3O95983 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
MBD3O95983 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
MBD3O95983 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
MBD3O95983 AC078925.2-201ENST00000624013 1973 ntBASIC20.15■□□□□ 0.82
MBD3O95983 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC20.15■□□□□ 0.82
MBD3O95983 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC20.15■□□□□ 0.82
MBD3O95983 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms