Protein–RNA interactions for Protein: O94788

ALDH1A2, Retinal dehydrogenase 2, humanhuman

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A2O94788 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
ALDH1A2O94788 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ALDH1A2O94788 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.51
ALDH1A2O94788 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
ALDH1A2O94788 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ALDH1A2O94788 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.26■□□□□ 0.51
ALDH1A2O94788 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ALDH1A2O94788 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ALDH1A2O94788 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ALDH1A2O94788 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
ALDH1A2O94788 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
ALDH1A2O94788 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ALDH1A2O94788 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.26■□□□□ 0.51
ALDH1A2O94788 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ALDH1A2O94788 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ALDH1A2O94788 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
ALDH1A2O94788 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.26■□□□□ 0.51
ALDH1A2O94788 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.26■□□□□ 0.51
ALDH1A2O94788 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.26■□□□□ 0.51
ALDH1A2O94788 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.26■□□□□ 0.51
ALDH1A2O94788 SLC25A1P1-201ENST00000528351 927 ntBASIC18.26■□□□□ 0.51
ALDH1A2O94788 AC139887.3-201ENST00000568585 713 ntBASIC18.26■□□□□ 0.51
ALDH1A2O94788 AC139530.3-201ENST00000620344 690 ntBASIC18.26■□□□□ 0.51
ALDH1A2O94788 AC009154.2-201ENST00000621177 724 ntBASIC18.26■□□□□ 0.51
ALDH1A2O94788 AC148477.8-201ENST00000624298 468 ntBASIC18.26■□□□□ 0.51
ALDH1A2O94788 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ALDH1A2O94788 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ALDH1A2O94788 ZNF259P1-201ENST00000407656 1365 ntBASIC18.26■□□□□ 0.51
ALDH1A2O94788 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.26■□□□□ 0.51
ALDH1A2O94788 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.26■□□□□ 0.51
ALDH1A2O94788 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ALDH1A2O94788 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ALDH1A2O94788 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ALDH1A2O94788 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.25■□□□□ 0.51
ALDH1A2O94788 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ALDH1A2O94788 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
ALDH1A2O94788 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ALDH1A2O94788 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ALDH1A2O94788 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
ALDH1A2O94788 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
ALDH1A2O94788 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
ALDH1A2O94788 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.25■□□□□ 0.51
ALDH1A2O94788 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.25■□□□□ 0.51
ALDH1A2O94788 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ALDH1A2O94788 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.25■□□□□ 0.51
ALDH1A2O94788 AC018712.1-201ENST00000455767 687 ntBASIC18.25■□□□□ 0.51
ALDH1A2O94788 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC18.25■□□□□ 0.51
ALDH1A2O94788 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ALDH1A2O94788 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.25■□□□□ 0.51
ALDH1A2O94788 AC106730.1-201ENST00000566722 1090 ntBASIC18.25■□□□□ 0.51
ALDH1A2O94788 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ALDH1A2O94788 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ALDH1A2O94788 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.25■□□□□ 0.51
ALDH1A2O94788 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.25■□□□□ 0.51
ALDH1A2O94788 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
ALDH1A2O94788 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ALDH1A2O94788 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ALDH1A2O94788 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ALDH1A2O94788 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
ALDH1A2O94788 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.24■□□□□ 0.51
ALDH1A2O94788 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ALDH1A2O94788 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
ALDH1A2O94788 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.24■□□□□ 0.51
ALDH1A2O94788 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ALDH1A2O94788 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ALDH1A2O94788 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
ALDH1A2O94788 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ALDH1A2O94788 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.24■□□□□ 0.51
ALDH1A2O94788 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ALDH1A2O94788 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.24■□□□□ 0.51
ALDH1A2O94788 AC005336.2-201ENST00000593183 939 ntBASIC18.24■□□□□ 0.51
ALDH1A2O94788 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.24■□□□□ 0.51
ALDH1A2O94788 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.24■□□□□ 0.51
ALDH1A2O94788 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.24■□□□□ 0.51
ALDH1A2O94788 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ALDH1A2O94788 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ALDH1A2O94788 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
ALDH1A2O94788 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ALDH1A2O94788 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.24■□□□□ 0.51
ALDH1A2O94788 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ALDH1A2O94788 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ALDH1A2O94788 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
ALDH1A2O94788 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.24■□□□□ 0.51
ALDH1A2O94788 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
ALDH1A2O94788 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ALDH1A2O94788 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ALDH1A2O94788 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ALDH1A2O94788 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ALDH1A2O94788 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.23■□□□□ 0.51
ALDH1A2O94788 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
ALDH1A2O94788 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.23■□□□□ 0.51
ALDH1A2O94788 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ALDH1A2O94788 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
ALDH1A2O94788 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ALDH1A2O94788 AL645608.8-201ENST00000606034 2086 ntBASIC18.23■□□□□ 0.51
ALDH1A2O94788 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ALDH1A2O94788 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ALDH1A2O94788 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.23■□□□□ 0.51
ALDH1A2O94788 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ALDH1A2O94788 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms