Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.96■□□□□ 0.47
CLDN11O75508 MTDHP4-201ENST00000600287 670 ntBASIC17.96■□□□□ 0.47
CLDN11O75508 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.96■□□□□ 0.47
CLDN11O75508 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN11O75508 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN11O75508 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN11O75508 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
CLDN11O75508 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN11O75508 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN11O75508 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.96■□□□□ 0.47
CLDN11O75508 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CLDN11O75508 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.96■□□□□ 0.46
CLDN11O75508 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.96■□□□□ 0.46
CLDN11O75508 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.95■□□□□ 0.46
CLDN11O75508 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN11O75508 AC134043.2-201ENST00000624206 2238 ntBASIC17.95■□□□□ 0.46
CLDN11O75508 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.95■□□□□ 0.46
CLDN11O75508 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN11O75508 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.95■□□□□ 0.46
CLDN11O75508 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CLDN11O75508 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.95■□□□□ 0.46
CLDN11O75508 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN11O75508 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN11O75508 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.95■□□□□ 0.46
CLDN11O75508 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.95■□□□□ 0.46
CLDN11O75508 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.95■□□□□ 0.46
CLDN11O75508 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.95■□□□□ 0.46
CLDN11O75508 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CLDN11O75508 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN11O75508 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.95■□□□□ 0.46
CLDN11O75508 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.95■□□□□ 0.46
CLDN11O75508 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.95■□□□□ 0.46
CLDN11O75508 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.95■□□□□ 0.46
CLDN11O75508 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.95■□□□□ 0.46
CLDN11O75508 AC025062.2-201ENST00000605477 670 ntBASIC17.95■□□□□ 0.46
CLDN11O75508 AL139327.4-201ENST00000612362 153 ntBASIC17.95■□□□□ 0.46
CLDN11O75508 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.95■□□□□ 0.46
CLDN11O75508 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.95■□□□□ 0.46
CLDN11O75508 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CLDN11O75508 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN11O75508 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CLDN11O75508 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.95■□□□□ 0.46
CLDN11O75508 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN11O75508 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN11O75508 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.95■□□□□ 0.46
CLDN11O75508 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN11O75508 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN11O75508 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN11O75508 AC148477.5-201ENST00000625164 1645 ntBASIC17.94■□□□□ 0.46
CLDN11O75508 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN11O75508 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN11O75508 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN11O75508 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.94■□□□□ 0.46
CLDN11O75508 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN11O75508 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.94■□□□□ 0.46
CLDN11O75508 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN11O75508 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN11O75508 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN11O75508 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN11O75508 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN11O75508 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN11O75508 RPS2P28-201ENST00000314255 741 ntBASIC17.94■□□□□ 0.46
CLDN11O75508 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN11O75508 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CLDN11O75508 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.94■□□□□ 0.46
CLDN11O75508 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.94■□□□□ 0.46
CLDN11O75508 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.94■□□□□ 0.46
CLDN11O75508 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN11O75508 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.94■□□□□ 0.46
CLDN11O75508 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.94■□□□□ 0.46
CLDN11O75508 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CLDN11O75508 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.94■□□□□ 0.46
CLDN11O75508 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.94■□□□□ 0.46
CLDN11O75508 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN11O75508 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN11O75508 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN11O75508 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.94■□□□□ 0.46
CLDN11O75508 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
CLDN11O75508 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN11O75508 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.94■□□□□ 0.46
CLDN11O75508 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN11O75508 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN11O75508 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN11O75508 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.93■□□□□ 0.46
CLDN11O75508 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN11O75508 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.93■□□□□ 0.46
CLDN11O75508 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN11O75508 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.93■□□□□ 0.46
CLDN11O75508 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.93■□□□□ 0.46
CLDN11O75508 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN11O75508 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.93■□□□□ 0.46
CLDN11O75508 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CLDN11O75508 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.93■□□□□ 0.46
CLDN11O75508 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.93■□□□□ 0.46
CLDN11O75508 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.93■□□□□ 0.46
CLDN11O75508 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN11O75508 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.93■□□□□ 0.46
CLDN11O75508 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CLDN11O75508 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN11O75508 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms