Protein–RNA interactions for Protein: O15541

RNF113A, RING finger protein 113A, humanhuman

Known RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF113AO15541 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RNF113AO15541 AC004817.3-201ENST00000602957 2129 ntBASIC21.08■□□□□ 0.96
RNF113AO15541 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
RNF113AO15541 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RNF113AO15541 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
RNF113AO15541 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
RNF113AO15541 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC21.07■□□□□ 0.96
RNF113AO15541 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC21.07■□□□□ 0.96
RNF113AO15541 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RNF113AO15541 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF113AO15541 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC21.07■□□□□ 0.96
RNF113AO15541 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF113AO15541 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RNF113AO15541 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF113AO15541 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF113AO15541 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF113AO15541 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC21.07■□□□□ 0.96
RNF113AO15541 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
RNF113AO15541 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC21.07■□□□□ 0.96
RNF113AO15541 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF113AO15541 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RNF113AO15541 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RNF113AO15541 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RNF113AO15541 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
RNF113AO15541 BX005266.1-201ENST00000473402 457 ntBASIC21.07■□□□□ 0.96
RNF113AO15541 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC21.07■□□□□ 0.96
RNF113AO15541 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC21.07■□□□□ 0.96
RNF113AO15541 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
RNF113AO15541 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF113AO15541 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC21.07■□□□□ 0.96
RNF113AO15541 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC21.07■□□□□ 0.96
RNF113AO15541 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RNF113AO15541 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF113AO15541 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RNF113AO15541 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC21.07■□□□□ 0.96
RNF113AO15541 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF113AO15541 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC21.06■□□□□ 0.96
RNF113AO15541 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC21.06■□□□□ 0.96
RNF113AO15541 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
RNF113AO15541 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF113AO15541 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC21.06■□□□□ 0.96
RNF113AO15541 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF113AO15541 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RNF113AO15541 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC21.06■□□□□ 0.96
RNF113AO15541 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC21.06■□□□□ 0.96
RNF113AO15541 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC21.06■□□□□ 0.96
RNF113AO15541 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF113AO15541 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
RNF113AO15541 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF113AO15541 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF113AO15541 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF113AO15541 SCARNA2-201ENST00000458748 420 ntBASIC21.06■□□□□ 0.96
RNF113AO15541 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF113AO15541 AL160237.2-201ENST00000556165 472 ntBASIC21.06■□□□□ 0.96
RNF113AO15541 PAM16-208ENST00000573553 722 ntTSL 2 BASIC21.06■□□□□ 0.96
RNF113AO15541 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RNF113AO15541 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF113AO15541 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RNF113AO15541 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC21.06■□□□□ 0.96
RNF113AO15541 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RNF113AO15541 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC21.06■□□□□ 0.96
RNF113AO15541 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC21.05■□□□□ 0.96
RNF113AO15541 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF113AO15541 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RNF113AO15541 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
RNF113AO15541 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
RNF113AO15541 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
RNF113AO15541 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
RNF113AO15541 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RNF113AO15541 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF113AO15541 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF113AO15541 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RNF113AO15541 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF113AO15541 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC21.05■□□□□ 0.96
RNF113AO15541 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF113AO15541 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RNF113AO15541 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RNF113AO15541 ENSA-206ENST00000361631 725 ntTSL 2 BASIC21.05■□□□□ 0.96
RNF113AO15541 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
RNF113AO15541 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
RNF113AO15541 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RNF113AO15541 PRYP5-201ENST00000451909 266 ntBASIC21.05■□□□□ 0.96
RNF113AO15541 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC21.05■□□□□ 0.96
RNF113AO15541 CALM3-211ENST00000598871 561 ntTSL 4 BASIC21.05■□□□□ 0.96
RNF113AO15541 COPE-211ENST00000600932 1144 ntTSL 5 BASIC21.05■□□□□ 0.96
RNF113AO15541 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC21.05■□□□□ 0.96
RNF113AO15541 AC046185.3-201ENST00000623228 1824 ntBASIC21.05■□□□□ 0.96
RNF113AO15541 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF113AO15541 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF113AO15541 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RNF113AO15541 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF113AO15541 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF113AO15541 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF113AO15541 AL138688.1-201ENST00000624851 1594 ntBASIC21.05■□□□□ 0.96
RNF113AO15541 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
RNF113AO15541 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC21.05■□□□□ 0.96
RNF113AO15541 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC21.05■□□□□ 0.96
RNF113AO15541 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF113AO15541 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RNF113AO15541 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms