Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC24.17■■□□□ 1.46
CHD2O14647 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
CHD2O14647 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CHD2O14647 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC24.17■■□□□ 1.46
CHD2O14647 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
CHD2O14647 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC24.17■■□□□ 1.46
CHD2O14647 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
CHD2O14647 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC24.17■■□□□ 1.46
CHD2O14647 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC24.17■■□□□ 1.46
CHD2O14647 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC24.17■■□□□ 1.46
CHD2O14647 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
CHD2O14647 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC24.17■■□□□ 1.46
CHD2O14647 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC24.17■■□□□ 1.46
CHD2O14647 MIR6752-201ENST00000618442 71 ntBASIC24.17■■□□□ 1.46
CHD2O14647 AL358472.5-202ENST00000641448 1267 ntBASIC24.17■■□□□ 1.46
CHD2O14647 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC24.16■■□□□ 1.46
CHD2O14647 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CHD2O14647 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC24.16■■□□□ 1.46
CHD2O14647 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC24.16■■□□□ 1.46
CHD2O14647 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CHD2O14647 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
CHD2O14647 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC24.16■■□□□ 1.46
CHD2O14647 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CHD2O14647 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC24.16■■□□□ 1.46
CHD2O14647 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC24.16■■□□□ 1.46
CHD2O14647 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
CHD2O14647 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC24.16■■□□□ 1.46
CHD2O14647 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC24.16■■□□□ 1.46
CHD2O14647 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CHD2O14647 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC24.16■■□□□ 1.46
CHD2O14647 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC24.16■■□□□ 1.46
CHD2O14647 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC24.16■■□□□ 1.46
CHD2O14647 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC24.16■■□□□ 1.46
CHD2O14647 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CHD2O14647 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
CHD2O14647 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CHD2O14647 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CHD2O14647 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CHD2O14647 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
CHD2O14647 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC24.15■■□□□ 1.46
CHD2O14647 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
CHD2O14647 AC093677.2-201ENST00000600169 1863 ntBASIC24.15■■□□□ 1.46
CHD2O14647 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CHD2O14647 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
CHD2O14647 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC24.15■■□□□ 1.46
CHD2O14647 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC24.15■■□□□ 1.46
CHD2O14647 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC24.15■■□□□ 1.46
CHD2O14647 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CHD2O14647 ALG1L8P-201ENST00000533887 760 ntBASIC24.15■■□□□ 1.46
CHD2O14647 AC010336.2-201ENST00000564226 506 ntBASIC24.15■■□□□ 1.46
CHD2O14647 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC24.15■■□□□ 1.46
CHD2O14647 AL008721.1-201ENST00000609964 604 ntBASIC24.15■■□□□ 1.46
CHD2O14647 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CHD2O14647 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CHD2O14647 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CHD2O14647 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC24.15■■□□□ 1.46
CHD2O14647 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC24.15■■□□□ 1.46
CHD2O14647 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC24.15■■□□□ 1.46
CHD2O14647 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC24.15■■□□□ 1.46
CHD2O14647 AC100757.3-201ENST00000622361 1406 ntBASIC24.15■■□□□ 1.46
CHD2O14647 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CHD2O14647 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.46
CHD2O14647 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC24.14■■□□□ 1.46
CHD2O14647 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC24.14■■□□□ 1.46
CHD2O14647 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC24.14■■□□□ 1.46
CHD2O14647 KRT8P23-201ENST00000560090 1207 ntBASIC24.14■■□□□ 1.46
CHD2O14647 MIR4515-201ENST00000584082 81 ntBASIC24.14■■□□□ 1.46
CHD2O14647 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
CHD2O14647 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.46
CHD2O14647 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.46
CHD2O14647 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
CHD2O14647 UXT-AS1-201ENST00000590504 1525 ntBASIC24.14■■□□□ 1.46
CHD2O14647 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
CHD2O14647 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC24.14■■□□□ 1.45
CHD2O14647 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
CHD2O14647 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC24.14■■□□□ 1.45
CHD2O14647 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC24.14■■□□□ 1.45
CHD2O14647 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC24.14■■□□□ 1.45
CHD2O14647 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC24.14■■□□□ 1.45
CHD2O14647 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
CHD2O14647 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC24.14■■□□□ 1.45
CHD2O14647 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC24.14■■□□□ 1.45
CHD2O14647 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
CHD2O14647 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC24.14■■□□□ 1.45
CHD2O14647 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC24.14■■□□□ 1.45
CHD2O14647 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
CHD2O14647 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
CHD2O14647 AC116562.4-201ENST00000641316 2276 ntBASIC24.13■■□□□ 1.45
CHD2O14647 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CHD2O14647 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC24.13■■□□□ 1.45
CHD2O14647 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CHD2O14647 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
CHD2O14647 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
CHD2O14647 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC24.13■■□□□ 1.45
CHD2O14647 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC24.13■■□□□ 1.45
CHD2O14647 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC24.13■■□□□ 1.45
CHD2O14647 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
CHD2O14647 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC24.13■■□□□ 1.45
CHD2O14647 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
CHD2O14647 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms