Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPSF4LA6NMK7 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.26■□□□□ 0.19
CPSF4LA6NMK7 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPSF4LA6NMK7 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPSF4LA6NMK7 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.26■□□□□ 0.19
CPSF4LA6NMK7 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPSF4LA6NMK7 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPSF4LA6NMK7 IGHGP-201ENST00000390555 1178 ntBASIC16.26■□□□□ 0.19
CPSF4LA6NMK7 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CPSF4LA6NMK7 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.26■□□□□ 0.19
CPSF4LA6NMK7 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.26■□□□□ 0.19
CPSF4LA6NMK7 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.26■□□□□ 0.19
CPSF4LA6NMK7 AC073912.3-201ENST00000624414 853 ntBASIC16.26■□□□□ 0.19
CPSF4LA6NMK7 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CPSF4LA6NMK7 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CPSF4LA6NMK7 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CPSF4LA6NMK7 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPSF4LA6NMK7 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CPSF4LA6NMK7 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.26■□□□□ 0.19
CPSF4LA6NMK7 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CPSF4LA6NMK7 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CPSF4LA6NMK7 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CPSF4LA6NMK7 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPSF4LA6NMK7 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPSF4LA6NMK7 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.26■□□□□ 0.19
CPSF4LA6NMK7 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPSF4LA6NMK7 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPSF4LA6NMK7 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CPSF4LA6NMK7 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CPSF4LA6NMK7 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CPSF4LA6NMK7 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CPSF4LA6NMK7 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.25■□□□□ 0.19
CPSF4LA6NMK7 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CPSF4LA6NMK7 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CPSF4LA6NMK7 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.25■□□□□ 0.19
CPSF4LA6NMK7 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CPSF4LA6NMK7 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CPSF4LA6NMK7 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CPSF4LA6NMK7 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
CPSF4LA6NMK7 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.25■□□□□ 0.19
CPSF4LA6NMK7 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CPSF4LA6NMK7 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CPSF4LA6NMK7 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.25■□□□□ 0.19
CPSF4LA6NMK7 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
CPSF4LA6NMK7 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.25■□□□□ 0.19
CPSF4LA6NMK7 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CPSF4LA6NMK7 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CPSF4LA6NMK7 AC005521.1-201ENST00000393351 872 ntBASIC16.25■□□□□ 0.19
CPSF4LA6NMK7 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CPSF4LA6NMK7 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.25■□□□□ 0.19
CPSF4LA6NMK7 KRT18P57-201ENST00000443599 1254 ntBASIC16.25■□□□□ 0.19
CPSF4LA6NMK7 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CPSF4LA6NMK7 AL359075.1-203ENST00000462729 1002 ntBASIC16.25■□□□□ 0.19
CPSF4LA6NMK7 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.25■□□□□ 0.19
CPSF4LA6NMK7 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CPSF4LA6NMK7 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.25■□□□□ 0.19
CPSF4LA6NMK7 AC012306.2-201ENST00000609350 630 ntBASIC16.25■□□□□ 0.19
CPSF4LA6NMK7 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.25■□□□□ 0.19
CPSF4LA6NMK7 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.25■□□□□ 0.19
CPSF4LA6NMK7 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CPSF4LA6NMK7 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CPSF4LA6NMK7 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.25■□□□□ 0.19
CPSF4LA6NMK7 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CPSF4LA6NMK7 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CPSF4LA6NMK7 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CPSF4LA6NMK7 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CPSF4LA6NMK7 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CPSF4LA6NMK7 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CPSF4LA6NMK7 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CPSF4LA6NMK7 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CPSF4LA6NMK7 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CPSF4LA6NMK7 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CPSF4LA6NMK7 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CPSF4LA6NMK7 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.24■□□□□ 0.19
CPSF4LA6NMK7 BX276092.7-203ENST00000637198 1536 ntBASIC16.24■□□□□ 0.19
CPSF4LA6NMK7 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
CPSF4LA6NMK7 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CPSF4LA6NMK7 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CPSF4LA6NMK7 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CPSF4LA6NMK7 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CPSF4LA6NMK7 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CPSF4LA6NMK7 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
CPSF4LA6NMK7 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CPSF4LA6NMK7 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CPSF4LA6NMK7 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CPSF4LA6NMK7 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CPSF4LA6NMK7 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.24■□□□□ 0.19
CPSF4LA6NMK7 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.24■□□□□ 0.19
CPSF4LA6NMK7 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.24■□□□□ 0.19
CPSF4LA6NMK7 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.24■□□□□ 0.19
CPSF4LA6NMK7 KRT18P38-201ENST00000449496 1282 ntBASIC16.24■□□□□ 0.19
CPSF4LA6NMK7 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.24■□□□□ 0.19
CPSF4LA6NMK7 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.24■□□□□ 0.19
CPSF4LA6NMK7 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.24■□□□□ 0.19
CPSF4LA6NMK7 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.24■□□□□ 0.19
CPSF4LA6NMK7 AC097493.4-201ENST00000641197 219 ntBASIC16.24■□□□□ 0.19
CPSF4LA6NMK7 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CPSF4LA6NMK7 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CPSF4LA6NMK7 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
CPSF4LA6NMK7 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms