Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
TRAV30A0A087WSZ9 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV30A0A087WSZ9 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV30A0A087WSZ9 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV30A0A087WSZ9 STARP1-201ENST00000397973 869 ntBASIC13.87□□□□□ -0.19
TRAV30A0A087WSZ9 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC13.87□□□□□ -0.19
TRAV30A0A087WSZ9 BX664615.1-201ENST00000443558 458 ntBASIC13.87□□□□□ -0.19
TRAV30A0A087WSZ9 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC13.87□□□□□ -0.19
TRAV30A0A087WSZ9 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC13.87□□□□□ -0.19
TRAV30A0A087WSZ9 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
TRAV30A0A087WSZ9 AL023973.1-201ENST00000624619 620 ntBASIC13.87□□□□□ -0.19
TRAV30A0A087WSZ9 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
TRAV30A0A087WSZ9 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV30A0A087WSZ9 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV30A0A087WSZ9 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
TRAV30A0A087WSZ9 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV30A0A087WSZ9 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV30A0A087WSZ9 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
TRAV30A0A087WSZ9 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV30A0A087WSZ9 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
TRAV30A0A087WSZ9 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV30A0A087WSZ9 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV30A0A087WSZ9 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV30A0A087WSZ9 LGALS8-AS1-201ENST00000487567 1457 ntBASIC13.87□□□□□ -0.19
TRAV30A0A087WSZ9 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV30A0A087WSZ9 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC13.86□□□□□ -0.19
TRAV30A0A087WSZ9 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV30A0A087WSZ9 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV30A0A087WSZ9 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
TRAV30A0A087WSZ9 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
TRAV30A0A087WSZ9 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV30A0A087WSZ9 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV30A0A087WSZ9 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
TRAV30A0A087WSZ9 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
TRAV30A0A087WSZ9 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
TRAV30A0A087WSZ9 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV30A0A087WSZ9 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV30A0A087WSZ9 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV30A0A087WSZ9 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV30A0A087WSZ9 F11R-206ENST00000621309 4770 ntTSL 5 BASIC13.86□□□□□ -0.19
TRAV30A0A087WSZ9 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
TRAV30A0A087WSZ9 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV30A0A087WSZ9 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
TRAV30A0A087WSZ9 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV30A0A087WSZ9 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC13.86□□□□□ -0.19
TRAV30A0A087WSZ9 AL596275.1-201ENST00000423464 877 ntBASIC13.86□□□□□ -0.19
TRAV30A0A087WSZ9 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC13.86□□□□□ -0.19
TRAV30A0A087WSZ9 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC13.86□□□□□ -0.19
TRAV30A0A087WSZ9 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC13.86□□□□□ -0.19
TRAV30A0A087WSZ9 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
TRAV30A0A087WSZ9 TK1-205ENST00000590862 642 ntTSL 3 BASIC13.86□□□□□ -0.19
TRAV30A0A087WSZ9 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
TRAV30A0A087WSZ9 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
TRAV30A0A087WSZ9 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV30A0A087WSZ9 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
TRAV30A0A087WSZ9 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV30A0A087WSZ9 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
TRAV30A0A087WSZ9 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV30A0A087WSZ9 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAV30A0A087WSZ9 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV30A0A087WSZ9 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV30A0A087WSZ9 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV30A0A087WSZ9 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV30A0A087WSZ9 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV30A0A087WSZ9 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV30A0A087WSZ9 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC13.86□□□□□ -0.19
TRAV30A0A087WSZ9 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV30A0A087WSZ9 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
TRAV30A0A087WSZ9 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV30A0A087WSZ9 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC13.85□□□□□ -0.19
TRAV30A0A087WSZ9 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC13.85□□□□□ -0.19
TRAV30A0A087WSZ9 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC13.85□□□□□ -0.19
TRAV30A0A087WSZ9 AC009949.1-201ENST00000623048 1830 ntBASIC13.85□□□□□ -0.19
TRAV30A0A087WSZ9 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
TRAV30A0A087WSZ9 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV30A0A087WSZ9 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV30A0A087WSZ9 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV30A0A087WSZ9 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV30A0A087WSZ9 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV30A0A087WSZ9 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
TRAV30A0A087WSZ9 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC13.85□□□□□ -0.19
TRAV30A0A087WSZ9 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV30A0A087WSZ9 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV30A0A087WSZ9 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC13.85□□□□□ -0.19
TRAV30A0A087WSZ9 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV30A0A087WSZ9 CD70-202ENST00000423145 881 ntTSL 2 BASIC13.85□□□□□ -0.19
TRAV30A0A087WSZ9 AL137013.1-201ENST00000432946 1228 ntBASIC13.85□□□□□ -0.19
TRAV30A0A087WSZ9 HLA-F-220ENST00000434407 884 ntBASIC13.85□□□□□ -0.19
TRAV30A0A087WSZ9 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC13.85□□□□□ -0.19
TRAV30A0A087WSZ9 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV30A0A087WSZ9 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV30A0A087WSZ9 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC13.85□□□□□ -0.19
TRAV30A0A087WSZ9 AC005363.2-201ENST00000618631 242 ntBASIC13.85□□□□□ -0.19
TRAV30A0A087WSZ9 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
TRAV30A0A087WSZ9 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
TRAV30A0A087WSZ9 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV30A0A087WSZ9 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC13.85□□□□□ -0.19
TRAV30A0A087WSZ9 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC13.85□□□□□ -0.19
TRAV30A0A087WSZ9 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV30A0A087WSZ9 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms