Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.27■□□□□ 0.35
DNMT3AQ9Y6K1 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
DNMT3AQ9Y6K1 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
DNMT3AQ9Y6K1 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
DNMT3AQ9Y6K1 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
DNMT3AQ9Y6K1 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DNMT3AQ9Y6K1 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.26■□□□□ 0.35
DNMT3AQ9Y6K1 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
DNMT3AQ9Y6K1 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
DNMT3AQ9Y6K1 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
DNMT3AQ9Y6K1 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.26■□□□□ 0.35
DNMT3AQ9Y6K1 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
DNMT3AQ9Y6K1 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DNMT3AQ9Y6K1 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DNMT3AQ9Y6K1 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.26■□□□□ 0.35
DNMT3AQ9Y6K1 REXO1L11P-201ENST00000620964 1927 ntBASIC17.26■□□□□ 0.35
DNMT3AQ9Y6K1 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DNMT3AQ9Y6K1 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.26■□□□□ 0.35
DNMT3AQ9Y6K1 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DNMT3AQ9Y6K1 AC003669.1-201ENST00000334569 611 ntBASIC17.26■□□□□ 0.35
DNMT3AQ9Y6K1 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DNMT3AQ9Y6K1 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
DNMT3AQ9Y6K1 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
DNMT3AQ9Y6K1 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
DNMT3AQ9Y6K1 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.26■□□□□ 0.35
DNMT3AQ9Y6K1 PRYP5-201ENST00000451909 266 ntBASIC17.26■□□□□ 0.35
DNMT3AQ9Y6K1 FGFR3P6-201ENST00000457012 610 ntBASIC17.26■□□□□ 0.35
DNMT3AQ9Y6K1 STK25P1-201ENST00000585406 838 ntBASIC17.26■□□□□ 0.35
DNMT3AQ9Y6K1 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.26■□□□□ 0.35
DNMT3AQ9Y6K1 AL139288.1-201ENST00000623748 933 ntBASIC17.26■□□□□ 0.35
DNMT3AQ9Y6K1 AC073592.4-201ENST00000623827 446 ntBASIC17.26■□□□□ 0.35
DNMT3AQ9Y6K1 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.26■□□□□ 0.35
DNMT3AQ9Y6K1 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
DNMT3AQ9Y6K1 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
DNMT3AQ9Y6K1 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.26■□□□□ 0.35
DNMT3AQ9Y6K1 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.26■□□□□ 0.35
DNMT3AQ9Y6K1 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DNMT3AQ9Y6K1 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.26■□□□□ 0.35
DNMT3AQ9Y6K1 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.26■□□□□ 0.35
DNMT3AQ9Y6K1 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
DNMT3AQ9Y6K1 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
DNMT3AQ9Y6K1 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.26■□□□□ 0.35
DNMT3AQ9Y6K1 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DNMT3AQ9Y6K1 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.26■□□□□ 0.35
DNMT3AQ9Y6K1 AC079776.2-201ENST00000641154 1609 ntBASIC17.25■□□□□ 0.35
DNMT3AQ9Y6K1 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.25■□□□□ 0.35
DNMT3AQ9Y6K1 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
DNMT3AQ9Y6K1 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
DNMT3AQ9Y6K1 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
DNMT3AQ9Y6K1 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
DNMT3AQ9Y6K1 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
DNMT3AQ9Y6K1 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
DNMT3AQ9Y6K1 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
DNMT3AQ9Y6K1 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
DNMT3AQ9Y6K1 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.25■□□□□ 0.35
DNMT3AQ9Y6K1 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
DNMT3AQ9Y6K1 AL160237.2-201ENST00000556165 472 ntBASIC17.25■□□□□ 0.35
DNMT3AQ9Y6K1 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.25■□□□□ 0.35
DNMT3AQ9Y6K1 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.25■□□□□ 0.35
DNMT3AQ9Y6K1 AC104692.2-201ENST00000603054 253 ntBASIC17.25■□□□□ 0.35
DNMT3AQ9Y6K1 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.25■□□□□ 0.35
DNMT3AQ9Y6K1 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.25■□□□□ 0.35
DNMT3AQ9Y6K1 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
DNMT3AQ9Y6K1 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.25■□□□□ 0.35
DNMT3AQ9Y6K1 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
DNMT3AQ9Y6K1 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.25■□□□□ 0.35
DNMT3AQ9Y6K1 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
DNMT3AQ9Y6K1 AL356309.3-201ENST00000624132 1934 ntBASIC17.25■□□□□ 0.35
DNMT3AQ9Y6K1 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.25■□□□□ 0.35
DNMT3AQ9Y6K1 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
DNMT3AQ9Y6K1 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.25■□□□□ 0.35
DNMT3AQ9Y6K1 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
DNMT3AQ9Y6K1 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
DNMT3AQ9Y6K1 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.25■□□□□ 0.35
DNMT3AQ9Y6K1 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
DNMT3AQ9Y6K1 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.24■□□□□ 0.35
DNMT3AQ9Y6K1 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
DNMT3AQ9Y6K1 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
DNMT3AQ9Y6K1 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.24■□□□□ 0.35
DNMT3AQ9Y6K1 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
DNMT3AQ9Y6K1 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
DNMT3AQ9Y6K1 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.24■□□□□ 0.35
DNMT3AQ9Y6K1 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
DNMT3AQ9Y6K1 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
DNMT3AQ9Y6K1 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.24■□□□□ 0.35
DNMT3AQ9Y6K1 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
DNMT3AQ9Y6K1 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.24■□□□□ 0.35
DNMT3AQ9Y6K1 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.24■□□□□ 0.35
DNMT3AQ9Y6K1 AL020989.1-201ENST00000422979 469 ntBASIC17.24■□□□□ 0.35
DNMT3AQ9Y6K1 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
DNMT3AQ9Y6K1 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.24■□□□□ 0.35
DNMT3AQ9Y6K1 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.24■□□□□ 0.35
DNMT3AQ9Y6K1 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.24■□□□□ 0.35
DNMT3AQ9Y6K1 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.24■□□□□ 0.35
DNMT3AQ9Y6K1 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
DNMT3AQ9Y6K1 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
DNMT3AQ9Y6K1 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.24■□□□□ 0.35
DNMT3AQ9Y6K1 HLA-J-201ENST00000462773 1622 ntBASIC17.24■□□□□ 0.35
DNMT3AQ9Y6K1 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.24■□□□□ 0.35
DNMT3AQ9Y6K1 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms