Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
HCFC2Q9Y5Z7 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HCFC2Q9Y5Z7 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
HCFC2Q9Y5Z7 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HCFC2Q9Y5Z7 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.29■□□□□ 0.52
HCFC2Q9Y5Z7 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.29■□□□□ 0.52
HCFC2Q9Y5Z7 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC18.29■□□□□ 0.52
HCFC2Q9Y5Z7 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
HCFC2Q9Y5Z7 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
HCFC2Q9Y5Z7 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HCFC2Q9Y5Z7 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HCFC2Q9Y5Z7 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
HCFC2Q9Y5Z7 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HCFC2Q9Y5Z7 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
HCFC2Q9Y5Z7 CD99-202ENST00000381180 530 ntTSL 2 BASIC18.29■□□□□ 0.52
HCFC2Q9Y5Z7 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
HCFC2Q9Y5Z7 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC18.29■□□□□ 0.52
HCFC2Q9Y5Z7 DAD1-205ENST00000543337 501 ntTSL 3 BASIC18.29■□□□□ 0.52
HCFC2Q9Y5Z7 AC022145.2-201ENST00000598203 171 ntBASIC18.29■□□□□ 0.52
HCFC2Q9Y5Z7 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HCFC2Q9Y5Z7 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.29■□□□□ 0.52
HCFC2Q9Y5Z7 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.29■□□□□ 0.52
HCFC2Q9Y5Z7 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
HCFC2Q9Y5Z7 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
HCFC2Q9Y5Z7 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
HCFC2Q9Y5Z7 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
HCFC2Q9Y5Z7 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HCFC2Q9Y5Z7 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HCFC2Q9Y5Z7 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
HCFC2Q9Y5Z7 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
HCFC2Q9Y5Z7 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HCFC2Q9Y5Z7 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HCFC2Q9Y5Z7 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HCFC2Q9Y5Z7 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HCFC2Q9Y5Z7 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC18.28■□□□□ 0.52
HCFC2Q9Y5Z7 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HCFC2Q9Y5Z7 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HCFC2Q9Y5Z7 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HCFC2Q9Y5Z7 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.28■□□□□ 0.52
HCFC2Q9Y5Z7 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
HCFC2Q9Y5Z7 AC092919.2-201ENST00000623631 1645 ntBASIC18.28■□□□□ 0.52
HCFC2Q9Y5Z7 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.28■□□□□ 0.52
HCFC2Q9Y5Z7 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HCFC2Q9Y5Z7 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
HCFC2Q9Y5Z7 MYCLP1-201ENST00000372451 1075 ntBASIC18.28■□□□□ 0.52
HCFC2Q9Y5Z7 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HCFC2Q9Y5Z7 CBR1-202ENST00000399191 838 ntTSL 3 BASIC18.28■□□□□ 0.52
HCFC2Q9Y5Z7 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HCFC2Q9Y5Z7 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC18.28■□□□□ 0.52
HCFC2Q9Y5Z7 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC18.28■□□□□ 0.52
HCFC2Q9Y5Z7 AC023141.5-201ENST00000458585 616 ntBASIC18.28■□□□□ 0.52
HCFC2Q9Y5Z7 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC18.28■□□□□ 0.52
HCFC2Q9Y5Z7 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
HCFC2Q9Y5Z7 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC18.28■□□□□ 0.52
HCFC2Q9Y5Z7 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC18.28■□□□□ 0.52
HCFC2Q9Y5Z7 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC18.28■□□□□ 0.52
HCFC2Q9Y5Z7 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
HCFC2Q9Y5Z7 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HCFC2Q9Y5Z7 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HCFC2Q9Y5Z7 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC18.28■□□□□ 0.52
HCFC2Q9Y5Z7 AL121761.2-201ENST00000598007 1648 ntBASIC18.27■□□□□ 0.52
HCFC2Q9Y5Z7 AL590787.1-201ENST00000568856 1315 ntBASIC18.27■□□□□ 0.52
HCFC2Q9Y5Z7 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HCFC2Q9Y5Z7 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HCFC2Q9Y5Z7 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HCFC2Q9Y5Z7 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HCFC2Q9Y5Z7 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
HCFC2Q9Y5Z7 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HCFC2Q9Y5Z7 ACTG1P4-201ENST00000425123 1122 ntBASIC18.27■□□□□ 0.52
HCFC2Q9Y5Z7 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.27■□□□□ 0.52
HCFC2Q9Y5Z7 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC18.27■□□□□ 0.52
HCFC2Q9Y5Z7 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC18.27■□□□□ 0.52
HCFC2Q9Y5Z7 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HCFC2Q9Y5Z7 AC025678.2-201ENST00000562061 970 ntBASIC18.27■□□□□ 0.52
HCFC2Q9Y5Z7 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC18.27■□□□□ 0.52
HCFC2Q9Y5Z7 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HCFC2Q9Y5Z7 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
HCFC2Q9Y5Z7 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
HCFC2Q9Y5Z7 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
HCFC2Q9Y5Z7 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
HCFC2Q9Y5Z7 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
HCFC2Q9Y5Z7 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
HCFC2Q9Y5Z7 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.27■□□□□ 0.51
HCFC2Q9Y5Z7 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.27■□□□□ 0.51
HCFC2Q9Y5Z7 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.26■□□□□ 0.51
HCFC2Q9Y5Z7 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.26■□□□□ 0.51
HCFC2Q9Y5Z7 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HCFC2Q9Y5Z7 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HCFC2Q9Y5Z7 AC006116.8-202ENST00000587620 1550 ntBASIC18.26■□□□□ 0.51
HCFC2Q9Y5Z7 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
HCFC2Q9Y5Z7 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
HCFC2Q9Y5Z7 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
HCFC2Q9Y5Z7 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
HCFC2Q9Y5Z7 FAM185BP-201ENST00000443595 716 ntBASIC18.26■□□□□ 0.51
HCFC2Q9Y5Z7 COX20P2-201ENST00000452636 358 ntBASIC18.26■□□□□ 0.51
HCFC2Q9Y5Z7 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
HCFC2Q9Y5Z7 AC109322.1-201ENST00000524499 1264 ntBASIC18.26■□□□□ 0.51
HCFC2Q9Y5Z7 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HCFC2Q9Y5Z7 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HCFC2Q9Y5Z7 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms