Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGA3Q9Y5H0 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGA3Q9Y5H0 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGA3Q9Y5H0 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
PCDHGA3Q9Y5H0 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGA3Q9Y5H0 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGA3Q9Y5H0 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
PCDHGA3Q9Y5H0 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.14■□□□□ 0.34
PCDHGA3Q9Y5H0 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
PCDHGA3Q9Y5H0 AC125634.1-201ENST00000438758 1403 ntBASIC17.14■□□□□ 0.33
PCDHGA3Q9Y5H0 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.14■□□□□ 0.33
PCDHGA3Q9Y5H0 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGA3Q9Y5H0 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGA3Q9Y5H0 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGA3Q9Y5H0 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGA3Q9Y5H0 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.14■□□□□ 0.33
PCDHGA3Q9Y5H0 RPS2P28-201ENST00000314255 741 ntBASIC17.14■□□□□ 0.33
PCDHGA3Q9Y5H0 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.14■□□□□ 0.33
PCDHGA3Q9Y5H0 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.14■□□□□ 0.33
PCDHGA3Q9Y5H0 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.14■□□□□ 0.33
PCDHGA3Q9Y5H0 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.14■□□□□ 0.33
PCDHGA3Q9Y5H0 AC106730.1-201ENST00000566722 1090 ntBASIC17.14■□□□□ 0.33
PCDHGA3Q9Y5H0 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.14■□□□□ 0.33
PCDHGA3Q9Y5H0 AC139887.3-201ENST00000568585 713 ntBASIC17.14■□□□□ 0.33
PCDHGA3Q9Y5H0 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.14■□□□□ 0.33
PCDHGA3Q9Y5H0 MTDHP3-201ENST00000594186 672 ntBASIC17.14■□□□□ 0.33
PCDHGA3Q9Y5H0 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.14■□□□□ 0.33
PCDHGA3Q9Y5H0 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.14■□□□□ 0.33
PCDHGA3Q9Y5H0 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.14■□□□□ 0.33
PCDHGA3Q9Y5H0 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.14■□□□□ 0.33
PCDHGA3Q9Y5H0 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.14■□□□□ 0.33
PCDHGA3Q9Y5H0 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.14■□□□□ 0.33
PCDHGA3Q9Y5H0 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGA3Q9Y5H0 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGA3Q9Y5H0 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
PCDHGA3Q9Y5H0 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.14■□□□□ 0.33
PCDHGA3Q9Y5H0 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGA3Q9Y5H0 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGA3Q9Y5H0 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
PCDHGA3Q9Y5H0 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGA3Q9Y5H0 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.14■□□□□ 0.33
PCDHGA3Q9Y5H0 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGA3Q9Y5H0 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
PCDHGA3Q9Y5H0 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGA3Q9Y5H0 AC243591.1-201ENST00000452967 1364 ntBASIC17.14■□□□□ 0.33
PCDHGA3Q9Y5H0 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.14■□□□□ 0.33
PCDHGA3Q9Y5H0 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA3Q9Y5H0 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA3Q9Y5H0 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA3Q9Y5H0 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA3Q9Y5H0 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA3Q9Y5H0 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA3Q9Y5H0 ANO7L1-203ENST00000602586 1720 ntBASIC17.13■□□□□ 0.33
PCDHGA3Q9Y5H0 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA3Q9Y5H0 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA3Q9Y5H0 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA3Q9Y5H0 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
PCDHGA3Q9Y5H0 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA3Q9Y5H0 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA3Q9Y5H0 AC009053.2-201ENST00000563701 2365 ntBASIC17.13■□□□□ 0.33
PCDHGA3Q9Y5H0 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.13■□□□□ 0.33
PCDHGA3Q9Y5H0 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA3Q9Y5H0 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDHGA3Q9Y5H0 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.13■□□□□ 0.33
PCDHGA3Q9Y5H0 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDHGA3Q9Y5H0 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.13■□□□□ 0.33
PCDHGA3Q9Y5H0 KRT18P65-201ENST00000439811 1286 ntBASIC17.13■□□□□ 0.33
PCDHGA3Q9Y5H0 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA3Q9Y5H0 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDHGA3Q9Y5H0 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.13■□□□□ 0.33
PCDHGA3Q9Y5H0 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.13■□□□□ 0.33
PCDHGA3Q9Y5H0 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.13■□□□□ 0.33
PCDHGA3Q9Y5H0 FAM215A-202ENST00000632077 792 ntBASIC17.13■□□□□ 0.33
PCDHGA3Q9Y5H0 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA3Q9Y5H0 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.13■□□□□ 0.33
PCDHGA3Q9Y5H0 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA3Q9Y5H0 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.13■□□□□ 0.33
PCDHGA3Q9Y5H0 PKD1P1-201ENST00000458669 6805 ntBASIC17.13■□□□□ 0.33
PCDHGA3Q9Y5H0 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
PCDHGA3Q9Y5H0 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
PCDHGA3Q9Y5H0 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA3Q9Y5H0 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA3Q9Y5H0 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
PCDHGA3Q9Y5H0 ESPNP-201ENST00000270691 2015 ntBASIC17.13■□□□□ 0.33
PCDHGA3Q9Y5H0 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA3Q9Y5H0 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDHGA3Q9Y5H0 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA3Q9Y5H0 AC124067.4-201ENST00000519691 2379 ntBASIC17.13■□□□□ 0.33
PCDHGA3Q9Y5H0 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.12■□□□□ 0.33
PCDHGA3Q9Y5H0 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA3Q9Y5H0 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PCDHGA3Q9Y5H0 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA3Q9Y5H0 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PCDHGA3Q9Y5H0 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.12■□□□□ 0.33
PCDHGA3Q9Y5H0 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
PCDHGA3Q9Y5H0 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
PCDHGA3Q9Y5H0 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA3Q9Y5H0 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA3Q9Y5H0 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA3Q9Y5H0 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms