Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
PCDHB13Q9Y5F0 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC19.49■□□□□ 0.71
PCDHB13Q9Y5F0 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHB13Q9Y5F0 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC19.49■□□□□ 0.71
PCDHB13Q9Y5F0 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHB13Q9Y5F0 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB13Q9Y5F0 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB13Q9Y5F0 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB13Q9Y5F0 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB13Q9Y5F0 HLA-J-201ENST00000462773 1622 ntBASIC19.48■□□□□ 0.71
PCDHB13Q9Y5F0 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
PCDHB13Q9Y5F0 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB13Q9Y5F0 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
PCDHB13Q9Y5F0 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB13Q9Y5F0 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB13Q9Y5F0 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC19.48■□□□□ 0.71
PCDHB13Q9Y5F0 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
PCDHB13Q9Y5F0 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC19.48■□□□□ 0.71
PCDHB13Q9Y5F0 ADAM3B-201ENST00000569937 840 ntBASIC19.48■□□□□ 0.71
PCDHB13Q9Y5F0 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB13Q9Y5F0 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.48■□□□□ 0.71
PCDHB13Q9Y5F0 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.48■□□□□ 0.71
PCDHB13Q9Y5F0 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC19.48■□□□□ 0.71
PCDHB13Q9Y5F0 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB13Q9Y5F0 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB13Q9Y5F0 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB13Q9Y5F0 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB13Q9Y5F0 RPL23A-204ENST00000422514 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB13Q9Y5F0 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB13Q9Y5F0 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
PCDHB13Q9Y5F0 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
PCDHB13Q9Y5F0 TP73-AS1-210ENST00000637775 1455 ntBASIC19.48■□□□□ 0.71
PCDHB13Q9Y5F0 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB13Q9Y5F0 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
PCDHB13Q9Y5F0 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC19.47■□□□□ 0.71
PCDHB13Q9Y5F0 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.47■□□□□ 0.71
PCDHB13Q9Y5F0 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB13Q9Y5F0 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB13Q9Y5F0 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB13Q9Y5F0 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB13Q9Y5F0 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB13Q9Y5F0 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB13Q9Y5F0 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB13Q9Y5F0 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
PCDHB13Q9Y5F0 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.47■□□□□ 0.71
PCDHB13Q9Y5F0 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC19.47■□□□□ 0.71
PCDHB13Q9Y5F0 POM121L3P-201ENST00000419331 1163 ntBASIC19.47■□□□□ 0.71
PCDHB13Q9Y5F0 AC005104.2-201ENST00000427818 678 ntBASIC19.47■□□□□ 0.71
PCDHB13Q9Y5F0 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB13Q9Y5F0 HMGB3P14-201ENST00000494195 599 ntBASIC19.47■□□□□ 0.71
PCDHB13Q9Y5F0 AC011467.2-201ENST00000598425 242 ntBASIC19.47■□□□□ 0.71
PCDHB13Q9Y5F0 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB13Q9Y5F0 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC19.47■□□□□ 0.71
PCDHB13Q9Y5F0 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC19.47■□□□□ 0.71
PCDHB13Q9Y5F0 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
PCDHB13Q9Y5F0 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB13Q9Y5F0 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB13Q9Y5F0 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB13Q9Y5F0 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB13Q9Y5F0 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB13Q9Y5F0 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC19.47■□□□□ 0.71
PCDHB13Q9Y5F0 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.47■□□□□ 0.71
PCDHB13Q9Y5F0 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB13Q9Y5F0 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC19.46■□□□□ 0.71
PCDHB13Q9Y5F0 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
PCDHB13Q9Y5F0 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC19.46■□□□□ 0.71
PCDHB13Q9Y5F0 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
PCDHB13Q9Y5F0 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC19.46■□□□□ 0.71
PCDHB13Q9Y5F0 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.46■□□□□ 0.71
PCDHB13Q9Y5F0 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC19.46■□□□□ 0.71
PCDHB13Q9Y5F0 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB13Q9Y5F0 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB13Q9Y5F0 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB13Q9Y5F0 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC19.46■□□□□ 0.71
PCDHB13Q9Y5F0 CD9-202ENST00000382515 1229 ntTSL 5 BASIC19.46■□□□□ 0.71
PCDHB13Q9Y5F0 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC19.46■□□□□ 0.71
PCDHB13Q9Y5F0 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC19.46■□□□□ 0.71
PCDHB13Q9Y5F0 AC103564.2-201ENST00000432853 1299 ntBASIC19.46■□□□□ 0.71
PCDHB13Q9Y5F0 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB13Q9Y5F0 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.46■□□□□ 0.71
PCDHB13Q9Y5F0 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB13Q9Y5F0 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC19.46■□□□□ 0.71
PCDHB13Q9Y5F0 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB13Q9Y5F0 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
PCDHB13Q9Y5F0 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB13Q9Y5F0 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.46■□□□□ 0.71
PCDHB13Q9Y5F0 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB13Q9Y5F0 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB13Q9Y5F0 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB13Q9Y5F0 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB13Q9Y5F0 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB13Q9Y5F0 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.7
PCDHB13Q9Y5F0 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC19.45■□□□□ 0.7
PCDHB13Q9Y5F0 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHB13Q9Y5F0 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHB13Q9Y5F0 EML3-212ENST00000494176 2901 ntTSL 2 BASIC19.45■□□□□ 0.7
PCDHB13Q9Y5F0 EML3-216ENST00000529309 2909 ntTSL 2 BASIC19.45■□□□□ 0.7
PCDHB13Q9Y5F0 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
PCDHB13Q9Y5F0 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHB13Q9Y5F0 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms