Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC12.69□□□□□ -0.38
CHTOPQ9Y3Y2 OS9-205ENST00000413095 1660 ntTSL 2 BASIC12.69□□□□□ -0.38
CHTOPQ9Y3Y2 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CHTOPQ9Y3Y2 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
CHTOPQ9Y3Y2 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CHTOPQ9Y3Y2 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC12.69□□□□□ -0.38
CHTOPQ9Y3Y2 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CHTOPQ9Y3Y2 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CHTOPQ9Y3Y2 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CHTOPQ9Y3Y2 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC12.69□□□□□ -0.38
CHTOPQ9Y3Y2 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC12.68□□□□□ -0.38
CHTOPQ9Y3Y2 KCNIP3-201ENST00000295225 2940 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CHTOPQ9Y3Y2 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC12.68□□□□□ -0.38
CHTOPQ9Y3Y2 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC12.68□□□□□ -0.38
CHTOPQ9Y3Y2 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CHTOPQ9Y3Y2 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CHTOPQ9Y3Y2 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
CHTOPQ9Y3Y2 RCC2P3-201ENST00000418112 1537 ntBASIC12.68□□□□□ -0.38
CHTOPQ9Y3Y2 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC12.68□□□□□ -0.38
CHTOPQ9Y3Y2 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CHTOPQ9Y3Y2 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CHTOPQ9Y3Y2 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CHTOPQ9Y3Y2 DENND3-221ENST00000523308 2959 ntTSL 2 BASIC12.68□□□□□ -0.38
CHTOPQ9Y3Y2 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CHTOPQ9Y3Y2 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC12.68□□□□□ -0.38
CHTOPQ9Y3Y2 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CHTOPQ9Y3Y2 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CHTOPQ9Y3Y2 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
CHTOPQ9Y3Y2 AP000593.1-201ENST00000393668 712 ntBASIC12.68□□□□□ -0.38
CHTOPQ9Y3Y2 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CHTOPQ9Y3Y2 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC12.68□□□□□ -0.38
CHTOPQ9Y3Y2 RHOD-202ENST00000532559 538 ntTSL 3 BASIC12.68□□□□□ -0.38
CHTOPQ9Y3Y2 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC12.68□□□□□ -0.38
CHTOPQ9Y3Y2 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC12.68□□□□□ -0.38
CHTOPQ9Y3Y2 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC12.68□□□□□ -0.38
CHTOPQ9Y3Y2 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
CHTOPQ9Y3Y2 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC12.68□□□□□ -0.38
CHTOPQ9Y3Y2 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CHTOPQ9Y3Y2 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC12.68□□□□□ -0.38
CHTOPQ9Y3Y2 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CHTOPQ9Y3Y2 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CHTOPQ9Y3Y2 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
CHTOPQ9Y3Y2 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CHTOPQ9Y3Y2 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC12.68□□□□□ -0.38
CHTOPQ9Y3Y2 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
CHTOPQ9Y3Y2 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
CHTOPQ9Y3Y2 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CHTOPQ9Y3Y2 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CHTOPQ9Y3Y2 MYB-201ENST00000316528 3571 ntTSL 5 BASIC12.68□□□□□ -0.38
CHTOPQ9Y3Y2 MYB-241ENST00000616088 3573 ntTSL 5 BASIC12.68□□□□□ -0.38
CHTOPQ9Y3Y2 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC12.67□□□□□ -0.38
CHTOPQ9Y3Y2 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
CHTOPQ9Y3Y2 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
CHTOPQ9Y3Y2 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CHTOPQ9Y3Y2 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC12.67□□□□□ -0.38
CHTOPQ9Y3Y2 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CHTOPQ9Y3Y2 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CHTOPQ9Y3Y2 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CHTOPQ9Y3Y2 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
CHTOPQ9Y3Y2 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC12.67□□□□□ -0.38
CHTOPQ9Y3Y2 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CHTOPQ9Y3Y2 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CHTOPQ9Y3Y2 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CHTOPQ9Y3Y2 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CHTOPQ9Y3Y2 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
CHTOPQ9Y3Y2 STX7-201ENST00000367937 1090 ntTSL 5 BASIC12.67□□□□□ -0.38
CHTOPQ9Y3Y2 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CHTOPQ9Y3Y2 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC12.67□□□□□ -0.38
CHTOPQ9Y3Y2 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CHTOPQ9Y3Y2 AC093787.1-201ENST00000450396 207 ntBASIC12.67□□□□□ -0.38
CHTOPQ9Y3Y2 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC12.67□□□□□ -0.38
CHTOPQ9Y3Y2 RGMA-211ENST00000557420 989 ntTSL 3 BASIC12.67□□□□□ -0.38
CHTOPQ9Y3Y2 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC12.67□□□□□ -0.38
CHTOPQ9Y3Y2 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC12.67□□□□□ -0.38
CHTOPQ9Y3Y2 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CHTOPQ9Y3Y2 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CHTOPQ9Y3Y2 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CHTOPQ9Y3Y2 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
CHTOPQ9Y3Y2 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
CHTOPQ9Y3Y2 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
CHTOPQ9Y3Y2 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
CHTOPQ9Y3Y2 AC118758.2-201ENST00000614242 2813 ntBASIC12.67□□□□□ -0.38
CHTOPQ9Y3Y2 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CHTOPQ9Y3Y2 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CHTOPQ9Y3Y2 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CHTOPQ9Y3Y2 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CHTOPQ9Y3Y2 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CHTOPQ9Y3Y2 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CHTOPQ9Y3Y2 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CHTOPQ9Y3Y2 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC12.67□□□□□ -0.38
CHTOPQ9Y3Y2 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CHTOPQ9Y3Y2 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CHTOPQ9Y3Y2 KRT8P41-201ENST00000533985 1514 ntBASIC12.67□□□□□ -0.38
CHTOPQ9Y3Y2 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CHTOPQ9Y3Y2 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CHTOPQ9Y3Y2 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
CHTOPQ9Y3Y2 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CHTOPQ9Y3Y2 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC12.66□□□□□ -0.38
CHTOPQ9Y3Y2 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CHTOPQ9Y3Y2 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms