Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
COL17A1Q9UMD9 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
COL17A1Q9UMD9 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC26.38■■□□□ 1.81
COL17A1Q9UMD9 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
COL17A1Q9UMD9 PTPA-220ENST00000436883 532 ntTSL 4 BASIC26.38■■□□□ 1.81
COL17A1Q9UMD9 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC26.38■■□□□ 1.81
COL17A1Q9UMD9 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC26.38■■□□□ 1.81
COL17A1Q9UMD9 THTPA-204ENST00000554970 569 ntTSL 4 BASIC26.38■■□□□ 1.81
COL17A1Q9UMD9 THTPA-206ENST00000556015 535 ntTSL 3 BASIC26.38■■□□□ 1.81
COL17A1Q9UMD9 TP53TG3HP-202ENST00000569755 579 ntBASIC26.38■■□□□ 1.81
COL17A1Q9UMD9 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC26.38■■□□□ 1.81
COL17A1Q9UMD9 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC26.38■■□□□ 1.81
COL17A1Q9UMD9 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
COL17A1Q9UMD9 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
COL17A1Q9UMD9 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
COL17A1Q9UMD9 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
COL17A1Q9UMD9 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
COL17A1Q9UMD9 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
COL17A1Q9UMD9 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC26.37■■□□□ 1.81
COL17A1Q9UMD9 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
COL17A1Q9UMD9 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
COL17A1Q9UMD9 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC26.37■■□□□ 1.81
COL17A1Q9UMD9 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC26.37■■□□□ 1.81
COL17A1Q9UMD9 AC092658.1-201ENST00000505836 891 ntBASIC26.37■■□□□ 1.81
COL17A1Q9UMD9 AC109462.3-201ENST00000573934 613 ntBASIC26.37■■□□□ 1.81
COL17A1Q9UMD9 NAA38-206ENST00000576384 424 ntTSL 2 BASIC26.37■■□□□ 1.81
COL17A1Q9UMD9 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC26.37■■□□□ 1.81
COL17A1Q9UMD9 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC26.37■■□□□ 1.81
COL17A1Q9UMD9 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC26.37■■□□□ 1.81
COL17A1Q9UMD9 AL590560.3-201ENST00000623350 461 ntBASIC26.37■■□□□ 1.81
COL17A1Q9UMD9 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
COL17A1Q9UMD9 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC26.37■■□□□ 1.81
COL17A1Q9UMD9 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
COL17A1Q9UMD9 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC26.37■■□□□ 1.81
COL17A1Q9UMD9 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC26.36■■□□□ 1.81
COL17A1Q9UMD9 AC004945.1-201ENST00000416738 983 ntBASIC26.36■■□□□ 1.81
COL17A1Q9UMD9 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC26.36■■□□□ 1.81
COL17A1Q9UMD9 STK19B-204ENST00000512515 211 ntBASIC26.36■■□□□ 1.81
COL17A1Q9UMD9 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC26.36■■□□□ 1.81
COL17A1Q9UMD9 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
COL17A1Q9UMD9 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC26.36■■□□□ 1.81
COL17A1Q9UMD9 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC26.36■■□□□ 1.81
COL17A1Q9UMD9 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
COL17A1Q9UMD9 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC26.36■■□□□ 1.81
COL17A1Q9UMD9 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
COL17A1Q9UMD9 HARS-203ENST00000431330 1774 ntTSL 2 BASIC26.36■■□□□ 1.81
COL17A1Q9UMD9 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC26.36■■□□□ 1.81
COL17A1Q9UMD9 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
COL17A1Q9UMD9 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
COL17A1Q9UMD9 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
COL17A1Q9UMD9 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
COL17A1Q9UMD9 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
COL17A1Q9UMD9 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC26.36■■□□□ 1.81
COL17A1Q9UMD9 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC26.36■■□□□ 1.81
COL17A1Q9UMD9 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC26.36■■□□□ 1.81
COL17A1Q9UMD9 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC26.36■■□□□ 1.81
COL17A1Q9UMD9 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
COL17A1Q9UMD9 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC26.35■■□□□ 1.81
COL17A1Q9UMD9 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC26.35■■□□□ 1.81
COL17A1Q9UMD9 AC022144.1-201ENST00000602255 1580 ntBASIC26.35■■□□□ 1.81
COL17A1Q9UMD9 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC26.35■■□□□ 1.81
COL17A1Q9UMD9 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
COL17A1Q9UMD9 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
COL17A1Q9UMD9 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
COL17A1Q9UMD9 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC26.35■■□□□ 1.81
COL17A1Q9UMD9 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC26.35■■□□□ 1.81
COL17A1Q9UMD9 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC26.35■■□□□ 1.81
COL17A1Q9UMD9 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC26.35■■□□□ 1.81
COL17A1Q9UMD9 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
COL17A1Q9UMD9 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC26.35■■□□□ 1.81
COL17A1Q9UMD9 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC26.35■■□□□ 1.81
COL17A1Q9UMD9 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC26.35■■□□□ 1.81
COL17A1Q9UMD9 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC26.35■■□□□ 1.81
COL17A1Q9UMD9 TMED1-207ENST00000591695 809 ntTSL 5 BASIC26.35■■□□□ 1.81
COL17A1Q9UMD9 AC004233.3-201ENST00000607794 1269 ntBASIC26.35■■□□□ 1.81
COL17A1Q9UMD9 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC26.35■■□□□ 1.81
COL17A1Q9UMD9 AC100803.2-201ENST00000562459 1963 ntBASIC26.34■■□□□ 1.81
COL17A1Q9UMD9 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC26.34■■□□□ 1.81
COL17A1Q9UMD9 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC26.34■■□□□ 1.81
COL17A1Q9UMD9 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC26.34■■□□□ 1.81
COL17A1Q9UMD9 AL049812.1-201ENST00000432563 2267 ntBASIC26.34■■□□□ 1.81
COL17A1Q9UMD9 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
COL17A1Q9UMD9 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
COL17A1Q9UMD9 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC26.34■■□□□ 1.81
COL17A1Q9UMD9 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
COL17A1Q9UMD9 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC26.34■■□□□ 1.81
COL17A1Q9UMD9 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
COL17A1Q9UMD9 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC26.34■■□□□ 1.81
COL17A1Q9UMD9 COQ4-205ENST00000609948 956 ntTSL 2 BASIC26.34■■□□□ 1.81
COL17A1Q9UMD9 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC26.34■■□□□ 1.81
COL17A1Q9UMD9 AL033527.4-201ENST00000641026 673 ntBASIC26.34■■□□□ 1.81
COL17A1Q9UMD9 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
COL17A1Q9UMD9 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
COL17A1Q9UMD9 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC26.34■■□□□ 1.81
COL17A1Q9UMD9 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
COL17A1Q9UMD9 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
COL17A1Q9UMD9 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
COL17A1Q9UMD9 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
COL17A1Q9UMD9 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
COL17A1Q9UMD9 PTGES2-AS1-201ENST00000443493 2100 ntBASIC26.33■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms