Protein–RNA interactions for Protein: Q9UKN8

GTF3C4, General transcription factor 3C polypeptide 4, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4Q9UKN8 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.96■□□□□ 0.63
GTF3C4Q9UKN8 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
GTF3C4Q9UKN8 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
GTF3C4Q9UKN8 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
GTF3C4Q9UKN8 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
GTF3C4Q9UKN8 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.96■□□□□ 0.63
GTF3C4Q9UKN8 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.96■□□□□ 0.63
GTF3C4Q9UKN8 AC079781.3-201ENST00000449110 356 ntBASIC18.96■□□□□ 0.63
GTF3C4Q9UKN8 AC132008.2-207ENST00000454517 770 ntBASIC18.96■□□□□ 0.63
GTF3C4Q9UKN8 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.96■□□□□ 0.63
GTF3C4Q9UKN8 AC011467.2-201ENST00000598425 242 ntBASIC18.96■□□□□ 0.63
GTF3C4Q9UKN8 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.96■□□□□ 0.63
GTF3C4Q9UKN8 AL031008.1-201ENST00000619963 541 ntBASIC18.96■□□□□ 0.63
GTF3C4Q9UKN8 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
GTF3C4Q9UKN8 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
GTF3C4Q9UKN8 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
GTF3C4Q9UKN8 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
GTF3C4Q9UKN8 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
GTF3C4Q9UKN8 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.96■□□□□ 0.63
GTF3C4Q9UKN8 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
GTF3C4Q9UKN8 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.96■□□□□ 0.63
GTF3C4Q9UKN8 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
GTF3C4Q9UKN8 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
GTF3C4Q9UKN8 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.96■□□□□ 0.63
GTF3C4Q9UKN8 INTS4P1-201ENST00000438455 1935 ntBASIC18.96■□□□□ 0.63
GTF3C4Q9UKN8 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
GTF3C4Q9UKN8 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
GTF3C4Q9UKN8 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
GTF3C4Q9UKN8 AC139713.2-201ENST00000641328 2723 ntBASIC18.95■□□□□ 0.62
GTF3C4Q9UKN8 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.95■□□□□ 0.62
GTF3C4Q9UKN8 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
GTF3C4Q9UKN8 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.95■□□□□ 0.62
GTF3C4Q9UKN8 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.95■□□□□ 0.62
GTF3C4Q9UKN8 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.95■□□□□ 0.62
GTF3C4Q9UKN8 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.95■□□□□ 0.62
GTF3C4Q9UKN8 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
GTF3C4Q9UKN8 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
GTF3C4Q9UKN8 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
GTF3C4Q9UKN8 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
GTF3C4Q9UKN8 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
GTF3C4Q9UKN8 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.95■□□□□ 0.62
GTF3C4Q9UKN8 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.95■□□□□ 0.62
GTF3C4Q9UKN8 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.95■□□□□ 0.62
GTF3C4Q9UKN8 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
GTF3C4Q9UKN8 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
GTF3C4Q9UKN8 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.95■□□□□ 0.62
GTF3C4Q9UKN8 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
GTF3C4Q9UKN8 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.95■□□□□ 0.62
GTF3C4Q9UKN8 AC116407.2-201ENST00000613639 860 ntBASIC18.95■□□□□ 0.62
GTF3C4Q9UKN8 REXO1L6P-202ENST00000619970 1078 ntBASIC18.95■□□□□ 0.62
GTF3C4Q9UKN8 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.95■□□□□ 0.62
GTF3C4Q9UKN8 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
GTF3C4Q9UKN8 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.95■□□□□ 0.62
GTF3C4Q9UKN8 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
GTF3C4Q9UKN8 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.95■□□□□ 0.62
GTF3C4Q9UKN8 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.95■□□□□ 0.62
GTF3C4Q9UKN8 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.95■□□□□ 0.62
GTF3C4Q9UKN8 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
GTF3C4Q9UKN8 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.94■□□□□ 0.62
GTF3C4Q9UKN8 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GTF3C4Q9UKN8 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.94■□□□□ 0.62
GTF3C4Q9UKN8 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GTF3C4Q9UKN8 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.94■□□□□ 0.62
GTF3C4Q9UKN8 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
GTF3C4Q9UKN8 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
GTF3C4Q9UKN8 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.94■□□□□ 0.62
GTF3C4Q9UKN8 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GTF3C4Q9UKN8 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
GTF3C4Q9UKN8 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.94■□□□□ 0.62
GTF3C4Q9UKN8 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
GTF3C4Q9UKN8 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GTF3C4Q9UKN8 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.94■□□□□ 0.62
GTF3C4Q9UKN8 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
GTF3C4Q9UKN8 AF238378.1-201ENST00000526806 358 ntBASIC18.94■□□□□ 0.62
GTF3C4Q9UKN8 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.94■□□□□ 0.62
GTF3C4Q9UKN8 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.94■□□□□ 0.62
GTF3C4Q9UKN8 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.94■□□□□ 0.62
GTF3C4Q9UKN8 AC104692.2-201ENST00000603054 253 ntBASIC18.94■□□□□ 0.62
GTF3C4Q9UKN8 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.94■□□□□ 0.62
GTF3C4Q9UKN8 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
GTF3C4Q9UKN8 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.94■□□□□ 0.62
GTF3C4Q9UKN8 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GTF3C4Q9UKN8 LINC00304-203ENST00000565008 1864 ntBASIC18.94■□□□□ 0.62
GTF3C4Q9UKN8 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.94■□□□□ 0.62
GTF3C4Q9UKN8 AC097374.2-201ENST00000618617 1306 ntBASIC18.94■□□□□ 0.62
GTF3C4Q9UKN8 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GTF3C4Q9UKN8 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GTF3C4Q9UKN8 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
GTF3C4Q9UKN8 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GTF3C4Q9UKN8 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
GTF3C4Q9UKN8 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
GTF3C4Q9UKN8 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.93■□□□□ 0.62
GTF3C4Q9UKN8 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
GTF3C4Q9UKN8 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
GTF3C4Q9UKN8 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
GTF3C4Q9UKN8 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
GTF3C4Q9UKN8 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
GTF3C4Q9UKN8 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
GTF3C4Q9UKN8 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
GTF3C4Q9UKN8 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms