Protein–RNA interactions for Protein: Q9UIS9

MBD1, Methyl-CpG-binding domain protein 1, humanhuman

Predicted RBP Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1Q9UIS9 AC136632.2-201ENST00000512891 861 ntBASIC17.7■□□□□ 0.42
MBD1Q9UIS9 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
MBD1Q9UIS9 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.7■□□□□ 0.42
MBD1Q9UIS9 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.7■□□□□ 0.42
MBD1Q9UIS9 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.7■□□□□ 0.42
MBD1Q9UIS9 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
MBD1Q9UIS9 PGM5P2-202ENST00000637225 1043 ntBASIC17.7■□□□□ 0.42
MBD1Q9UIS9 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.7■□□□□ 0.42
MBD1Q9UIS9 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
MBD1Q9UIS9 SIGLEC16-201ENST00000599858 1437 ntBASIC17.7■□□□□ 0.42
MBD1Q9UIS9 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MBD1Q9UIS9 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MBD1Q9UIS9 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
MBD1Q9UIS9 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MBD1Q9UIS9 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
MBD1Q9UIS9 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
MBD1Q9UIS9 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
MBD1Q9UIS9 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
MBD1Q9UIS9 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
MBD1Q9UIS9 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MBD1Q9UIS9 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.69■□□□□ 0.42
MBD1Q9UIS9 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
MBD1Q9UIS9 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MBD1Q9UIS9 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
MBD1Q9UIS9 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MBD1Q9UIS9 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
MBD1Q9UIS9 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MBD1Q9UIS9 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
MBD1Q9UIS9 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MBD1Q9UIS9 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
MBD1Q9UIS9 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
MBD1Q9UIS9 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MBD1Q9UIS9 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MBD1Q9UIS9 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
MBD1Q9UIS9 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
MBD1Q9UIS9 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.69■□□□□ 0.42
MBD1Q9UIS9 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.69■□□□□ 0.42
MBD1Q9UIS9 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
MBD1Q9UIS9 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
MBD1Q9UIS9 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.69■□□□□ 0.42
MBD1Q9UIS9 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
MBD1Q9UIS9 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.69■□□□□ 0.42
MBD1Q9UIS9 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
MBD1Q9UIS9 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.69■□□□□ 0.42
MBD1Q9UIS9 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.69■□□□□ 0.42
MBD1Q9UIS9 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.69■□□□□ 0.42
MBD1Q9UIS9 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.69■□□□□ 0.42
MBD1Q9UIS9 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.69■□□□□ 0.42
MBD1Q9UIS9 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.69■□□□□ 0.42
MBD1Q9UIS9 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.69■□□□□ 0.42
MBD1Q9UIS9 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.69■□□□□ 0.42
MBD1Q9UIS9 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
MBD1Q9UIS9 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.69■□□□□ 0.42
MBD1Q9UIS9 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
MBD1Q9UIS9 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
MBD1Q9UIS9 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MBD1Q9UIS9 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.69■□□□□ 0.42
MBD1Q9UIS9 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.69■□□□□ 0.42
MBD1Q9UIS9 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MBD1Q9UIS9 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
MBD1Q9UIS9 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
MBD1Q9UIS9 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
MBD1Q9UIS9 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
MBD1Q9UIS9 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.69■□□□□ 0.42
MBD1Q9UIS9 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
MBD1Q9UIS9 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
MBD1Q9UIS9 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MBD1Q9UIS9 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.68■□□□□ 0.42
MBD1Q9UIS9 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.68■□□□□ 0.42
MBD1Q9UIS9 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.68■□□□□ 0.42
MBD1Q9UIS9 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
MBD1Q9UIS9 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MBD1Q9UIS9 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
MBD1Q9UIS9 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MBD1Q9UIS9 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MBD1Q9UIS9 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MBD1Q9UIS9 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MBD1Q9UIS9 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MBD1Q9UIS9 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
MBD1Q9UIS9 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
MBD1Q9UIS9 AC211486.1-202ENST00000416371 468 ntBASIC17.68■□□□□ 0.42
MBD1Q9UIS9 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.68■□□□□ 0.42
MBD1Q9UIS9 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.68■□□□□ 0.42
MBD1Q9UIS9 AC211476.1-201ENST00000503899 468 ntBASIC17.68■□□□□ 0.42
MBD1Q9UIS9 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
MBD1Q9UIS9 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.68■□□□□ 0.42
MBD1Q9UIS9 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.68■□□□□ 0.42
MBD1Q9UIS9 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.68■□□□□ 0.42
MBD1Q9UIS9 AC067852.2-201ENST00000590513 2313 ntBASIC17.68■□□□□ 0.42
MBD1Q9UIS9 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.68■□□□□ 0.42
MBD1Q9UIS9 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.68■□□□□ 0.42
MBD1Q9UIS9 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.68■□□□□ 0.42
MBD1Q9UIS9 AC073592.5-201ENST00000624854 528 ntBASIC17.68■□□□□ 0.42
MBD1Q9UIS9 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
MBD1Q9UIS9 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.68■□□□□ 0.42
MBD1Q9UIS9 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
MBD1Q9UIS9 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MBD1Q9UIS9 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
MBD1Q9UIS9 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.67■□□□□ 0.42
MBD1Q9UIS9 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms