Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.9■□□□□ 0.78
HDAC6Q9UBN7 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HDAC6Q9UBN7 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HDAC6Q9UBN7 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
HDAC6Q9UBN7 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
HDAC6Q9UBN7 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.9■□□□□ 0.78
HDAC6Q9UBN7 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
HDAC6Q9UBN7 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HDAC6Q9UBN7 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC19.89■□□□□ 0.78
HDAC6Q9UBN7 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
HDAC6Q9UBN7 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
HDAC6Q9UBN7 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HDAC6Q9UBN7 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
HDAC6Q9UBN7 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HDAC6Q9UBN7 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HDAC6Q9UBN7 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HDAC6Q9UBN7 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.89■□□□□ 0.77
HDAC6Q9UBN7 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
HDAC6Q9UBN7 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.89■□□□□ 0.77
HDAC6Q9UBN7 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
HDAC6Q9UBN7 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC19.89■□□□□ 0.77
HDAC6Q9UBN7 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HDAC6Q9UBN7 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
HDAC6Q9UBN7 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.89■□□□□ 0.77
HDAC6Q9UBN7 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HDAC6Q9UBN7 GMCL1P1-201ENST00000463439 1581 ntBASIC19.89■□□□□ 0.77
HDAC6Q9UBN7 IGHV3-22-201ENST00000520721 359 ntBASIC19.89■□□□□ 0.77
HDAC6Q9UBN7 AC012640.2-201ENST00000561606 901 ntBASIC19.89■□□□□ 0.77
HDAC6Q9UBN7 AC132938.6-201ENST00000623828 1655 ntBASIC19.89■□□□□ 0.77
HDAC6Q9UBN7 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC19.89■□□□□ 0.77
HDAC6Q9UBN7 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HDAC6Q9UBN7 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
HDAC6Q9UBN7 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC19.89■□□□□ 0.77
HDAC6Q9UBN7 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HDAC6Q9UBN7 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
HDAC6Q9UBN7 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HDAC6Q9UBN7 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HDAC6Q9UBN7 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HDAC6Q9UBN7 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
HDAC6Q9UBN7 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.88■□□□□ 0.77
HDAC6Q9UBN7 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HDAC6Q9UBN7 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HDAC6Q9UBN7 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HDAC6Q9UBN7 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
HDAC6Q9UBN7 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HDAC6Q9UBN7 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HDAC6Q9UBN7 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HDAC6Q9UBN7 CTNS-203ENST00000399306 803 ntTSL 3 BASIC19.88■□□□□ 0.77
HDAC6Q9UBN7 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
HDAC6Q9UBN7 RAB17-203ENST00000409576 466 ntTSL 3 BASIC19.88■□□□□ 0.77
HDAC6Q9UBN7 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
HDAC6Q9UBN7 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HDAC6Q9UBN7 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC19.88■□□□□ 0.77
HDAC6Q9UBN7 OR7E14P-202ENST00000530490 1290 ntBASIC19.88■□□□□ 0.77
HDAC6Q9UBN7 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HDAC6Q9UBN7 NKAPP1-205ENST00000585790 367 ntBASIC19.88■□□□□ 0.77
HDAC6Q9UBN7 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
HDAC6Q9UBN7 AC025062.2-201ENST00000605477 670 ntBASIC19.88■□□□□ 0.77
HDAC6Q9UBN7 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.88■□□□□ 0.77
HDAC6Q9UBN7 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
HDAC6Q9UBN7 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.88■□□□□ 0.77
HDAC6Q9UBN7 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HDAC6Q9UBN7 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.88■□□□□ 0.77
HDAC6Q9UBN7 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HDAC6Q9UBN7 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HDAC6Q9UBN7 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.87■□□□□ 0.77
HDAC6Q9UBN7 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HDAC6Q9UBN7 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HDAC6Q9UBN7 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.87■□□□□ 0.77
HDAC6Q9UBN7 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
HDAC6Q9UBN7 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
HDAC6Q9UBN7 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
HDAC6Q9UBN7 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HDAC6Q9UBN7 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC19.87■□□□□ 0.77
HDAC6Q9UBN7 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HDAC6Q9UBN7 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HDAC6Q9UBN7 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HDAC6Q9UBN7 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
HDAC6Q9UBN7 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
HDAC6Q9UBN7 SOD2-201ENST00000337404 991 ntTSL 2 BASIC19.87■□□□□ 0.77
HDAC6Q9UBN7 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC19.87■□□□□ 0.77
HDAC6Q9UBN7 AC145285.3-201ENST00000564603 959 ntBASIC19.87■□□□□ 0.77
HDAC6Q9UBN7 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
HDAC6Q9UBN7 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC19.87■□□□□ 0.77
HDAC6Q9UBN7 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HDAC6Q9UBN7 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC19.87■□□□□ 0.77
HDAC6Q9UBN7 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HDAC6Q9UBN7 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HDAC6Q9UBN7 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
HDAC6Q9UBN7 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
HDAC6Q9UBN7 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HDAC6Q9UBN7 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HDAC6Q9UBN7 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.87■□□□□ 0.77
HDAC6Q9UBN7 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
HDAC6Q9UBN7 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HDAC6Q9UBN7 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HDAC6Q9UBN7 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.86■□□□□ 0.77
HDAC6Q9UBN7 AC104109.2-201ENST00000602919 1418 ntBASIC19.86■□□□□ 0.77
HDAC6Q9UBN7 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
HDAC6Q9UBN7 AC106820.2-201ENST00000563775 3264 ntBASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms