Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.37■□□□□ 0.53
PPARGC1AQ9UBK2 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.37■□□□□ 0.53
PPARGC1AQ9UBK2 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
PPARGC1AQ9UBK2 DDX43P3-201ENST00000441064 443 ntBASIC18.37■□□□□ 0.53
PPARGC1AQ9UBK2 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PPARGC1AQ9UBK2 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PPARGC1AQ9UBK2 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.37■□□□□ 0.53
PPARGC1AQ9UBK2 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.37■□□□□ 0.53
PPARGC1AQ9UBK2 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PPARGC1AQ9UBK2 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.37■□□□□ 0.53
PPARGC1AQ9UBK2 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.37■□□□□ 0.53
PPARGC1AQ9UBK2 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.37■□□□□ 0.53
PPARGC1AQ9UBK2 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.37■□□□□ 0.53
PPARGC1AQ9UBK2 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PPARGC1AQ9UBK2 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PPARGC1AQ9UBK2 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.37■□□□□ 0.53
PPARGC1AQ9UBK2 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PPARGC1AQ9UBK2 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PPARGC1AQ9UBK2 NSUN5P1-202ENST00000421140 1535 ntBASIC18.37■□□□□ 0.53
PPARGC1AQ9UBK2 NSUN5P2-203ENST00000457352 1529 ntBASIC18.37■□□□□ 0.53
PPARGC1AQ9UBK2 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.37■□□□□ 0.53
PPARGC1AQ9UBK2 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.37■□□□□ 0.53
PPARGC1AQ9UBK2 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
PPARGC1AQ9UBK2 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.37■□□□□ 0.53
PPARGC1AQ9UBK2 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
PPARGC1AQ9UBK2 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
PPARGC1AQ9UBK2 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PPARGC1AQ9UBK2 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
PPARGC1AQ9UBK2 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PPARGC1AQ9UBK2 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
PPARGC1AQ9UBK2 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
PPARGC1AQ9UBK2 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.37■□□□□ 0.53
PPARGC1AQ9UBK2 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PPARGC1AQ9UBK2 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
PPARGC1AQ9UBK2 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
PPARGC1AQ9UBK2 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PPARGC1AQ9UBK2 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PPARGC1AQ9UBK2 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PPARGC1AQ9UBK2 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
PPARGC1AQ9UBK2 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PPARGC1AQ9UBK2 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PPARGC1AQ9UBK2 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PPARGC1AQ9UBK2 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PPARGC1AQ9UBK2 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PPARGC1AQ9UBK2 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PPARGC1AQ9UBK2 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PPARGC1AQ9UBK2 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
PPARGC1AQ9UBK2 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
PPARGC1AQ9UBK2 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
PPARGC1AQ9UBK2 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PPARGC1AQ9UBK2 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PPARGC1AQ9UBK2 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.36■□□□□ 0.53
PPARGC1AQ9UBK2 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.36■□□□□ 0.53
PPARGC1AQ9UBK2 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PPARGC1AQ9UBK2 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.36■□□□□ 0.53
PPARGC1AQ9UBK2 NUS1P1-201ENST00000446295 882 ntBASIC18.36■□□□□ 0.53
PPARGC1AQ9UBK2 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.36■□□□□ 0.53
PPARGC1AQ9UBK2 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.36■□□□□ 0.53
PPARGC1AQ9UBK2 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.36■□□□□ 0.53
PPARGC1AQ9UBK2 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.36■□□□□ 0.53
PPARGC1AQ9UBK2 AC009533.2-201ENST00000543664 586 ntBASIC18.36■□□□□ 0.53
PPARGC1AQ9UBK2 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
PPARGC1AQ9UBK2 MIR3652-201ENST00000579335 131 ntBASIC18.36■□□□□ 0.53
PPARGC1AQ9UBK2 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.36■□□□□ 0.53
PPARGC1AQ9UBK2 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PPARGC1AQ9UBK2 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PPARGC1AQ9UBK2 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.36■□□□□ 0.53
PPARGC1AQ9UBK2 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PPARGC1AQ9UBK2 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.36■□□□□ 0.53
PPARGC1AQ9UBK2 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PPARGC1AQ9UBK2 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.35■□□□□ 0.53
PPARGC1AQ9UBK2 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
PPARGC1AQ9UBK2 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PPARGC1AQ9UBK2 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PPARGC1AQ9UBK2 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.35■□□□□ 0.53
PPARGC1AQ9UBK2 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.35■□□□□ 0.53
PPARGC1AQ9UBK2 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PPARGC1AQ9UBK2 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PPARGC1AQ9UBK2 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.35■□□□□ 0.53
PPARGC1AQ9UBK2 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.35■□□□□ 0.53
PPARGC1AQ9UBK2 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.35■□□□□ 0.53
PPARGC1AQ9UBK2 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PPARGC1AQ9UBK2 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PPARGC1AQ9UBK2 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PPARGC1AQ9UBK2 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.35■□□□□ 0.53
PPARGC1AQ9UBK2 POM121L3P-201ENST00000419331 1163 ntBASIC18.35■□□□□ 0.53
PPARGC1AQ9UBK2 MINOS1P3-201ENST00000457048 203 ntBASIC18.35■□□□□ 0.53
PPARGC1AQ9UBK2 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.35■□□□□ 0.53
PPARGC1AQ9UBK2 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.35■□□□□ 0.53
PPARGC1AQ9UBK2 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.35■□□□□ 0.53
PPARGC1AQ9UBK2 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.35■□□□□ 0.53
PPARGC1AQ9UBK2 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PPARGC1AQ9UBK2 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PPARGC1AQ9UBK2 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
PPARGC1AQ9UBK2 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PPARGC1AQ9UBK2 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PPARGC1AQ9UBK2 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PPARGC1AQ9UBK2 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PPARGC1AQ9UBK2 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
PPARGC1AQ9UBK2 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms