Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
CXXC1Q9P0U4 AC079140.1-201ENST00000508039 487 ntBASIC18.76■□□□□ 0.59
CXXC1Q9P0U4 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC18.76■□□□□ 0.59
CXXC1Q9P0U4 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CXXC1Q9P0U4 AL512356.2-201ENST00000546955 174 ntBASIC18.76■□□□□ 0.59
CXXC1Q9P0U4 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.76■□□□□ 0.59
CXXC1Q9P0U4 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC18.76■□□□□ 0.59
CXXC1Q9P0U4 AL008721.1-201ENST00000609964 604 ntBASIC18.76■□□□□ 0.59
CXXC1Q9P0U4 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CXXC1Q9P0U4 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CXXC1Q9P0U4 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CXXC1Q9P0U4 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CXXC1Q9P0U4 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CXXC1Q9P0U4 AC009949.1-201ENST00000623048 1830 ntBASIC18.76■□□□□ 0.59
CXXC1Q9P0U4 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CXXC1Q9P0U4 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CXXC1Q9P0U4 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CXXC1Q9P0U4 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CXXC1Q9P0U4 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CXXC1Q9P0U4 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CXXC1Q9P0U4 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CXXC1Q9P0U4 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.75■□□□□ 0.59
CXXC1Q9P0U4 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CXXC1Q9P0U4 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.75■□□□□ 0.59
CXXC1Q9P0U4 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CXXC1Q9P0U4 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CXXC1Q9P0U4 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CXXC1Q9P0U4 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CXXC1Q9P0U4 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CXXC1Q9P0U4 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.75■□□□□ 0.59
CXXC1Q9P0U4 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
CXXC1Q9P0U4 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC18.75■□□□□ 0.59
CXXC1Q9P0U4 HNRNPA1P40-201ENST00000426371 1278 ntBASIC18.75■□□□□ 0.59
CXXC1Q9P0U4 GPS2P2-201ENST00000430745 888 ntBASIC18.75■□□□□ 0.59
CXXC1Q9P0U4 KLF2P3-201ENST00000451977 1087 ntBASIC18.75■□□□□ 0.59
CXXC1Q9P0U4 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CXXC1Q9P0U4 LINC02560-201ENST00000596379 459 ntBASIC18.75■□□□□ 0.59
CXXC1Q9P0U4 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CXXC1Q9P0U4 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC18.75■□□□□ 0.59
CXXC1Q9P0U4 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC18.75■□□□□ 0.59
CXXC1Q9P0U4 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CXXC1Q9P0U4 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CXXC1Q9P0U4 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CXXC1Q9P0U4 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
CXXC1Q9P0U4 AC116562.4-201ENST00000641316 2276 ntBASIC18.74■□□□□ 0.59
CXXC1Q9P0U4 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CXXC1Q9P0U4 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.74■□□□□ 0.59
CXXC1Q9P0U4 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.74■□□□□ 0.59
CXXC1Q9P0U4 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.74■□□□□ 0.59
CXXC1Q9P0U4 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CXXC1Q9P0U4 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC18.74■□□□□ 0.59
CXXC1Q9P0U4 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC18.74■□□□□ 0.59
CXXC1Q9P0U4 KRT18P32-201ENST00000424695 1287 ntBASIC18.74■□□□□ 0.59
CXXC1Q9P0U4 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.74■□□□□ 0.59
CXXC1Q9P0U4 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC18.74■□□□□ 0.59
CXXC1Q9P0U4 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.74■□□□□ 0.59
CXXC1Q9P0U4 AP005018.1-201ENST00000525475 301 ntBASIC18.74■□□□□ 0.59
CXXC1Q9P0U4 FAM86C2P-203ENST00000528684 1004 ntBASIC18.74■□□□□ 0.59
CXXC1Q9P0U4 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC18.74■□□□□ 0.59
CXXC1Q9P0U4 AC008761.3-201ENST00000624803 892 ntBASIC18.74■□□□□ 0.59
CXXC1Q9P0U4 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.74■□□□□ 0.59
CXXC1Q9P0U4 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CXXC1Q9P0U4 BX276092.7-203ENST00000637198 1536 ntBASIC18.74■□□□□ 0.59
CXXC1Q9P0U4 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
CXXC1Q9P0U4 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CXXC1Q9P0U4 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CXXC1Q9P0U4 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CXXC1Q9P0U4 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
CXXC1Q9P0U4 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
CXXC1Q9P0U4 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
CXXC1Q9P0U4 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CXXC1Q9P0U4 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CXXC1Q9P0U4 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.73■□□□□ 0.59
CXXC1Q9P0U4 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CXXC1Q9P0U4 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CXXC1Q9P0U4 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.73■□□□□ 0.59
CXXC1Q9P0U4 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC18.73■□□□□ 0.59
CXXC1Q9P0U4 CYP51A1P2-201ENST00000419457 1499 ntBASIC18.73■□□□□ 0.59
CXXC1Q9P0U4 FO538757.1-201ENST00000623083 1397 ntBASIC18.73■□□□□ 0.59
CXXC1Q9P0U4 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CXXC1Q9P0U4 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CXXC1Q9P0U4 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CXXC1Q9P0U4 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CXXC1Q9P0U4 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CXXC1Q9P0U4 MEIS3P1-201ENST00000495167 958 ntBASIC18.73■□□□□ 0.59
CXXC1Q9P0U4 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC18.73■□□□□ 0.59
CXXC1Q9P0U4 AC243562.1-201ENST00000560672 389 ntBASIC18.73■□□□□ 0.59
CXXC1Q9P0U4 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC18.73■□□□□ 0.59
CXXC1Q9P0U4 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC18.73■□□□□ 0.59
CXXC1Q9P0U4 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC18.73■□□□□ 0.59
CXXC1Q9P0U4 AP001059.3-201ENST00000619053 235 ntBASIC18.73■□□□□ 0.59
CXXC1Q9P0U4 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC18.73■□□□□ 0.59
CXXC1Q9P0U4 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CXXC1Q9P0U4 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CXXC1Q9P0U4 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CXXC1Q9P0U4 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CXXC1Q9P0U4 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CXXC1Q9P0U4 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.73■□□□□ 0.59
CXXC1Q9P0U4 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CXXC1Q9P0U4 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms