Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VAT1LQ9HCJ6 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
VAT1LQ9HCJ6 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
VAT1LQ9HCJ6 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC20.41■□□□□ 0.86
VAT1LQ9HCJ6 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC20.41■□□□□ 0.86
VAT1LQ9HCJ6 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VAT1LQ9HCJ6 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VAT1LQ9HCJ6 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VAT1LQ9HCJ6 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC20.41■□□□□ 0.86
VAT1LQ9HCJ6 NME9-203ENST00000383180 2133 ntTSL 2 BASIC20.41■□□□□ 0.86
VAT1LQ9HCJ6 NOC2LP1-202ENST00000452600 2235 ntBASIC20.41■□□□□ 0.86
VAT1LQ9HCJ6 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
VAT1LQ9HCJ6 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
VAT1LQ9HCJ6 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
VAT1LQ9HCJ6 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
VAT1LQ9HCJ6 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
VAT1LQ9HCJ6 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
VAT1LQ9HCJ6 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20.4■□□□□ 0.86
VAT1LQ9HCJ6 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
VAT1LQ9HCJ6 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
VAT1LQ9HCJ6 BX005266.1-201ENST00000473402 457 ntBASIC20.4■□□□□ 0.86
VAT1LQ9HCJ6 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
VAT1LQ9HCJ6 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
VAT1LQ9HCJ6 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC20.4■□□□□ 0.86
VAT1LQ9HCJ6 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC20.4■□□□□ 0.86
VAT1LQ9HCJ6 AC021087.4-201ENST00000563761 564 ntBASIC20.4■□□□□ 0.86
VAT1LQ9HCJ6 PAM16-208ENST00000573553 722 ntTSL 2 BASIC20.4■□□□□ 0.86
VAT1LQ9HCJ6 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC20.4■□□□□ 0.86
VAT1LQ9HCJ6 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
VAT1LQ9HCJ6 WDR88-203ENST00000592765 651 ntTSL 5 BASIC20.4■□□□□ 0.86
VAT1LQ9HCJ6 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC20.4■□□□□ 0.86
VAT1LQ9HCJ6 AC019129.2-201ENST00000609837 1235 ntBASIC20.4■□□□□ 0.86
VAT1LQ9HCJ6 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
VAT1LQ9HCJ6 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC20.4■□□□□ 0.86
VAT1LQ9HCJ6 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
VAT1LQ9HCJ6 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
VAT1LQ9HCJ6 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
VAT1LQ9HCJ6 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
VAT1LQ9HCJ6 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
VAT1LQ9HCJ6 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
VAT1LQ9HCJ6 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
VAT1LQ9HCJ6 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.86
VAT1LQ9HCJ6 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC20.39■□□□□ 0.86
VAT1LQ9HCJ6 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC20.39■□□□□ 0.86
VAT1LQ9HCJ6 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC20.39■□□□□ 0.86
VAT1LQ9HCJ6 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC20.39■□□□□ 0.86
VAT1LQ9HCJ6 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
VAT1LQ9HCJ6 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
VAT1LQ9HCJ6 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC20.39■□□□□ 0.85
VAT1LQ9HCJ6 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
VAT1LQ9HCJ6 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC20.39■□□□□ 0.85
VAT1LQ9HCJ6 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
VAT1LQ9HCJ6 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
VAT1LQ9HCJ6 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC20.39■□□□□ 0.85
VAT1LQ9HCJ6 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC20.39■□□□□ 0.85
VAT1LQ9HCJ6 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
VAT1LQ9HCJ6 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
VAT1LQ9HCJ6 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
VAT1LQ9HCJ6 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
VAT1LQ9HCJ6 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
VAT1LQ9HCJ6 SCARNA2-201ENST00000458748 420 ntBASIC20.39■□□□□ 0.85
VAT1LQ9HCJ6 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
VAT1LQ9HCJ6 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
VAT1LQ9HCJ6 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC20.39■□□□□ 0.85
VAT1LQ9HCJ6 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC20.39■□□□□ 0.85
VAT1LQ9HCJ6 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC20.39■□□□□ 0.85
VAT1LQ9HCJ6 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
VAT1LQ9HCJ6 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
VAT1LQ9HCJ6 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC20.39■□□□□ 0.85
VAT1LQ9HCJ6 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC20.39■□□□□ 0.85
VAT1LQ9HCJ6 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
VAT1LQ9HCJ6 REXO1L11P-201ENST00000620964 1927 ntBASIC20.39■□□□□ 0.85
VAT1LQ9HCJ6 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
VAT1LQ9HCJ6 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
VAT1LQ9HCJ6 HARS-201ENST00000307633 1780 ntTSL 2 BASIC20.39■□□□□ 0.85
VAT1LQ9HCJ6 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
VAT1LQ9HCJ6 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
VAT1LQ9HCJ6 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
VAT1LQ9HCJ6 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
VAT1LQ9HCJ6 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC20.38■□□□□ 0.85
VAT1LQ9HCJ6 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
VAT1LQ9HCJ6 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
VAT1LQ9HCJ6 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC20.38■□□□□ 0.85
VAT1LQ9HCJ6 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
VAT1LQ9HCJ6 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
VAT1LQ9HCJ6 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
VAT1LQ9HCJ6 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
VAT1LQ9HCJ6 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
VAT1LQ9HCJ6 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
VAT1LQ9HCJ6 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
VAT1LQ9HCJ6 MED22-202ENST00000371999 987 ntTSL 3 BASIC20.38■□□□□ 0.85
VAT1LQ9HCJ6 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
VAT1LQ9HCJ6 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC20.38■□□□□ 0.85
VAT1LQ9HCJ6 HNRNPDP1-201ENST00000439535 754 ntBASIC20.38■□□□□ 0.85
VAT1LQ9HCJ6 AF186996.4-201ENST00000467186 377 ntBASIC20.38■□□□□ 0.85
VAT1LQ9HCJ6 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC20.38■□□□□ 0.85
VAT1LQ9HCJ6 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC20.38■□□□□ 0.85
VAT1LQ9HCJ6 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC20.38■□□□□ 0.85
VAT1LQ9HCJ6 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC20.38■□□□□ 0.85
VAT1LQ9HCJ6 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms