Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC11.84□□□□□ -0.51
SND1-IT1Q9HBX3 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC11.84□□□□□ -0.51
SND1-IT1Q9HBX3 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
SND1-IT1Q9HBX3 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
SND1-IT1Q9HBX3 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
SND1-IT1Q9HBX3 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC11.84□□□□□ -0.51
SND1-IT1Q9HBX3 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SND1-IT1Q9HBX3 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SND1-IT1Q9HBX3 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC11.84□□□□□ -0.51
SND1-IT1Q9HBX3 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC11.84□□□□□ -0.51
SND1-IT1Q9HBX3 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SND1-IT1Q9HBX3 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SND1-IT1Q9HBX3 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SND1-IT1Q9HBX3 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SND1-IT1Q9HBX3 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
SND1-IT1Q9HBX3 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SND1-IT1Q9HBX3 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SND1-IT1Q9HBX3 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
SND1-IT1Q9HBX3 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
SND1-IT1Q9HBX3 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC11.84□□□□□ -0.51
SND1-IT1Q9HBX3 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SND1-IT1Q9HBX3 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SND1-IT1Q9HBX3 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SND1-IT1Q9HBX3 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SND1-IT1Q9HBX3 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SND1-IT1Q9HBX3 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC11.84□□□□□ -0.51
SND1-IT1Q9HBX3 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
SND1-IT1Q9HBX3 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
SND1-IT1Q9HBX3 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
SND1-IT1Q9HBX3 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
SND1-IT1Q9HBX3 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.51
SND1-IT1Q9HBX3 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.51
SND1-IT1Q9HBX3 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
SND1-IT1Q9HBX3 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
SND1-IT1Q9HBX3 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
SND1-IT1Q9HBX3 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SND1-IT1Q9HBX3 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
SND1-IT1Q9HBX3 FSCN1P1-201ENST00000568912 1481 ntBASIC11.83□□□□□ -0.52
SND1-IT1Q9HBX3 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SND1-IT1Q9HBX3 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
SND1-IT1Q9HBX3 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SND1-IT1Q9HBX3 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC11.83□□□□□ -0.52
SND1-IT1Q9HBX3 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC11.83□□□□□ -0.52
SND1-IT1Q9HBX3 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SND1-IT1Q9HBX3 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SND1-IT1Q9HBX3 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
SND1-IT1Q9HBX3 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC11.83□□□□□ -0.52
SND1-IT1Q9HBX3 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
SND1-IT1Q9HBX3 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC11.83□□□□□ -0.52
SND1-IT1Q9HBX3 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC11.83□□□□□ -0.52
SND1-IT1Q9HBX3 AL365209.1-201ENST00000624418 6473 ntBASIC11.83□□□□□ -0.52
SND1-IT1Q9HBX3 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC11.83□□□□□ -0.52
SND1-IT1Q9HBX3 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SND1-IT1Q9HBX3 ESRRAP1-201ENST00000400596 1257 ntBASIC11.83□□□□□ -0.52
SND1-IT1Q9HBX3 APTR-205ENST00000447009 902 ntTSL 2 BASIC11.83□□□□□ -0.52
SND1-IT1Q9HBX3 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
SND1-IT1Q9HBX3 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC11.83□□□□□ -0.52
SND1-IT1Q9HBX3 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC11.83□□□□□ -0.52
SND1-IT1Q9HBX3 AC073195.1-201ENST00000607241 877 ntBASIC11.83□□□□□ -0.52
SND1-IT1Q9HBX3 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
SND1-IT1Q9HBX3 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
SND1-IT1Q9HBX3 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC11.83□□□□□ -0.52
SND1-IT1Q9HBX3 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SND1-IT1Q9HBX3 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SND1-IT1Q9HBX3 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC11.83□□□□□ -0.52
SND1-IT1Q9HBX3 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SND1-IT1Q9HBX3 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SND1-IT1Q9HBX3 AC036111.1-201ENST00000533973 1582 ntBASIC11.83□□□□□ -0.52
SND1-IT1Q9HBX3 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SND1-IT1Q9HBX3 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SND1-IT1Q9HBX3 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC11.83□□□□□ -0.52
SND1-IT1Q9HBX3 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
SND1-IT1Q9HBX3 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SND1-IT1Q9HBX3 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC11.82□□□□□ -0.52
SND1-IT1Q9HBX3 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SND1-IT1Q9HBX3 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SND1-IT1Q9HBX3 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SND1-IT1Q9HBX3 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SND1-IT1Q9HBX3 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SND1-IT1Q9HBX3 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
SND1-IT1Q9HBX3 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC11.82□□□□□ -0.52
SND1-IT1Q9HBX3 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC11.82□□□□□ -0.52
SND1-IT1Q9HBX3 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SND1-IT1Q9HBX3 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SND1-IT1Q9HBX3 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SND1-IT1Q9HBX3 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SND1-IT1Q9HBX3 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
SND1-IT1Q9HBX3 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
SND1-IT1Q9HBX3 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SND1-IT1Q9HBX3 TK2-221ENST00000620035 5060 ntTSL 2 BASIC11.82□□□□□ -0.52
SND1-IT1Q9HBX3 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SND1-IT1Q9HBX3 KIRREL3-AS3-201ENST00000404882 831 ntBASIC11.82□□□□□ -0.52
SND1-IT1Q9HBX3 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC11.82□□□□□ -0.52
SND1-IT1Q9HBX3 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
SND1-IT1Q9HBX3 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC11.82□□□□□ -0.52
SND1-IT1Q9HBX3 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC11.82□□□□□ -0.52
SND1-IT1Q9HBX3 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC11.82□□□□□ -0.52
SND1-IT1Q9HBX3 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC11.82□□□□□ -0.52
SND1-IT1Q9HBX3 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC11.82□□□□□ -0.52
SND1-IT1Q9HBX3 AF186192.3-201ENST00000583427 947 ntBASIC11.82□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms