Protein–RNA interactions for Protein: Q9H3P2

NELFA, Negative elongation factor A, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFAQ9H3P2 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NELFAQ9H3P2 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
NELFAQ9H3P2 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
NELFAQ9H3P2 DDX43P3-201ENST00000441064 443 ntBASIC15.73■□□□□ 0.11
NELFAQ9H3P2 TOB2P1-201ENST00000469761 992 ntBASIC15.73■□□□□ 0.11
NELFAQ9H3P2 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC15.73■□□□□ 0.11
NELFAQ9H3P2 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC15.73■□□□□ 0.11
NELFAQ9H3P2 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC15.73■□□□□ 0.11
NELFAQ9H3P2 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC15.73■□□□□ 0.11
NELFAQ9H3P2 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
NELFAQ9H3P2 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC15.73■□□□□ 0.11
NELFAQ9H3P2 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC15.73■□□□□ 0.11
NELFAQ9H3P2 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
NELFAQ9H3P2 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC15.73■□□□□ 0.11
NELFAQ9H3P2 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NELFAQ9H3P2 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NELFAQ9H3P2 AC009949.1-201ENST00000623048 1830 ntBASIC15.73■□□□□ 0.11
NELFAQ9H3P2 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC15.73■□□□□ 0.11
NELFAQ9H3P2 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC15.73■□□□□ 0.11
NELFAQ9H3P2 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
NELFAQ9H3P2 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
NELFAQ9H3P2 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC15.72■□□□□ 0.11
NELFAQ9H3P2 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
NELFAQ9H3P2 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC15.72■□□□□ 0.11
NELFAQ9H3P2 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC15.72■□□□□ 0.11
NELFAQ9H3P2 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NELFAQ9H3P2 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NELFAQ9H3P2 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
NELFAQ9H3P2 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NELFAQ9H3P2 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NELFAQ9H3P2 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
NELFAQ9H3P2 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC15.72■□□□□ 0.11
NELFAQ9H3P2 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.72■□□□□ 0.11
NELFAQ9H3P2 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NELFAQ9H3P2 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NELFAQ9H3P2 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC15.72■□□□□ 0.11
NELFAQ9H3P2 HCG4P8-203ENST00000443049 980 ntBASIC15.72■□□□□ 0.11
NELFAQ9H3P2 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NELFAQ9H3P2 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NELFAQ9H3P2 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NELFAQ9H3P2 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC15.72■□□□□ 0.11
NELFAQ9H3P2 IL11-204ENST00000590625 1028 ntTSL 2 BASIC15.72■□□□□ 0.11
NELFAQ9H3P2 AC005336.2-201ENST00000593183 939 ntBASIC15.72■□□□□ 0.11
NELFAQ9H3P2 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NELFAQ9H3P2 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC15.72■□□□□ 0.11
NELFAQ9H3P2 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NELFAQ9H3P2 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NELFAQ9H3P2 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
NELFAQ9H3P2 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
NELFAQ9H3P2 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NELFAQ9H3P2 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NELFAQ9H3P2 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NELFAQ9H3P2 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
NELFAQ9H3P2 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
NELFAQ9H3P2 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
NELFAQ9H3P2 AC233702.3-201ENST00000578656 1387 ntBASIC15.72■□□□□ 0.11
NELFAQ9H3P2 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
NELFAQ9H3P2 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NELFAQ9H3P2 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
NELFAQ9H3P2 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NELFAQ9H3P2 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NELFAQ9H3P2 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.71■□□□□ 0.11
NELFAQ9H3P2 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC15.71■□□□□ 0.11
NELFAQ9H3P2 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NELFAQ9H3P2 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC15.71■□□□□ 0.11
NELFAQ9H3P2 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
NELFAQ9H3P2 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NELFAQ9H3P2 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
NELFAQ9H3P2 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NELFAQ9H3P2 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NELFAQ9H3P2 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NELFAQ9H3P2 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NELFAQ9H3P2 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC15.71■□□□□ 0.11
NELFAQ9H3P2 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC15.71■□□□□ 0.11
NELFAQ9H3P2 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NELFAQ9H3P2 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
NELFAQ9H3P2 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NELFAQ9H3P2 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
NELFAQ9H3P2 AC246785.2-201ENST00000432512 513 ntBASIC15.71■□□□□ 0.11
NELFAQ9H3P2 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC15.71■□□□□ 0.11
NELFAQ9H3P2 LINC00265-3P-201ENST00000447588 903 ntBASIC15.71■□□□□ 0.11
NELFAQ9H3P2 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC15.71■□□□□ 0.11
NELFAQ9H3P2 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC15.71■□□□□ 0.11
NELFAQ9H3P2 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC15.71■□□□□ 0.11
NELFAQ9H3P2 AC092329.2-201ENST00000598402 547 ntBASIC15.71■□□□□ 0.11
NELFAQ9H3P2 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NELFAQ9H3P2 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NELFAQ9H3P2 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.71■□□□□ 0.11
NELFAQ9H3P2 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC15.71■□□□□ 0.11
NELFAQ9H3P2 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NELFAQ9H3P2 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NELFAQ9H3P2 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC15.71■□□□□ 0.11
NELFAQ9H3P2 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC15.71■□□□□ 0.11
NELFAQ9H3P2 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC15.71■□□□□ 0.11
NELFAQ9H3P2 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
NELFAQ9H3P2 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
NELFAQ9H3P2 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
NELFAQ9H3P2 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
NELFAQ9H3P2 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
NELFAQ9H3P2 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms