Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 ENSA-205ENST00000361532 792 ntTSL 2 BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 KRT8P11-201ENST00000409686 1436 ntBASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 BX276092.2-201ENST00000417668 665 ntBASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 POU5F1P3-201ENST00000428824 1078 ntBASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 REXO2-208ENST00000539754 791 ntTSL 2 BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 AC004264.1-201ENST00000608354 794 ntBASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 AGGF1P2-201ENST00000426656 2106 ntBASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 AL109659.2-201ENST00000606809 1674 ntBASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 ABR-203ENST00000536794 2213 ntTSL 2 BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 AC067750.1-201ENST00000608826 6545 ntBASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 FLJ38576-201ENST00000623820 2459 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms